RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 ELOCQ15369 112 aa12.21□□□□□ -0.45
TRIM39-204ENST00000396548 SHBQ15464 509 aa12.21□□□□□ -0.45
TRIM39-204ENST00000396548 MAPRE2Q15555 327 aa12.21□□□□□ -0.45
TRIM39-204ENST00000396548 COQ5Q5HYK3 327 aa12.21□□□□□ -0.45
TRIM39-204ENST00000396548 REP15Q6BDI9 236 aa12.21□□□□□ -0.45
TRIM39-204ENST00000396548 OGFOD3Q6PK18 319 aa12.21□□□□□ -0.45
TRIM39-204ENST00000396548 ARMCX6Q7L4S7 300 aa12.21□□□□□ -0.45
TRIM39-204ENST00000396548 SDR16C5Q8N3Y7 309 aa12.21□□□□□ -0.45
TRIM39-204ENST00000396548 LIX1Q8N485 282 aa12.21□□□□□ -0.45
TRIM39-204ENST00000396548 ZNF548Q8NEK5 533 aaPredicted RBP12.21□□□□□ -0.45
TRIM39-204ENST00000396548 NUDT8Q8WV74 236 aa12.21□□□□□ -0.45
TRIM39-204ENST00000396548 PRAP1Q96NZ9 151 aa12.21□□□□□ -0.45
TRIM39-204ENST00000396548 NPAS2Q99743 824 aa12.21□□□□□ -0.45
TRIM39-204ENST00000396548 SLC25A23Q9BV35 468 aa12.21□□□□□ -0.45
TRIM39-204ENST00000396548 PILRBQ9UKJ0 227 aa12.21□□□□□ -0.45
TRIM39-204ENST00000396548 FAM221BA6H8Z2 402 aa12.21□□□□□ -0.46
TRIM39-204ENST00000396548 TNFSF14O43557 240 aa12.21□□□□□ -0.46
TRIM39-204ENST00000396548 LCMT2O60294 686 aaKnown RBP12.21□□□□□ -0.46
TRIM39-204ENST00000396548 NOBOXO60393 691 aa12.21□□□□□ -0.46
TRIM39-204ENST00000396548 NRP2O60462 931 aa12.21□□□□□ -0.46
TRIM39-204ENST00000396548 RASSF9O75901 435 aa12.21□□□□□ -0.46
TRIM39-204ENST00000396548 SDC1P18827 310 aa12.21□□□□□ -0.46
TRIM39-204ENST00000396548 DPP6P42658 865 aa12.21□□□□□ -0.46
TRIM39-204ENST00000396548 CTSKP43235 329 aa12.21□□□□□ -0.46
TRIM39-204ENST00000396548 CSTF1Q05048 431 aaKnown RBP12.21□□□□□ -0.46
TRIM39-204ENST00000396548 NOXRED1Q6NXP6 359 aa12.21□□□□□ -0.46
TRIM39-204ENST00000396548 GALNT18Q6P9A2 607 aa12.21□□□□□ -0.46
TRIM39-204ENST00000396548 PGM2L1Q6PCE3 622 aa12.21□□□□□ -0.46
TRIM39-204ENST00000396548 HACD2Q6Y1H2 254 aa12.21□□□□□ -0.46
TRIM39-204ENST00000396548 CREB3L4Q8TEY5 395 aa12.21□□□□□ -0.46
TRIM39-204ENST00000396548 UBE2E3Q969T4 207 aa12.21□□□□□ -0.46
TRIM39-204ENST00000396548 ZC3H10Q96K80 434 aaKnown RBP12.21□□□□□ -0.46
TRIM39-204ENST00000396548 MMADHCQ9H3L0 296 aaPredicted RBP12.21□□□□□ -0.46
TRIM39-204ENST00000396548 FBXO4Q9UKT5 387 aa12.21□□□□□ -0.46
TRIM39-204ENST00000396548 EIF3LQ9Y262 564 aaKnown RBP12.21□□□□□ -0.46
TRIM39-204ENST00000396548 BBIP1A8MTZ0 92 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 PCNAP12004 261 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 TACR1P25103 407 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 STX5Q13190 355 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 CUL3Q13618 768 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 PTGR1Q14914 329 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 KIR2DS3Q14952 304 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 HIST2H2ACQ16777 129 aaPredicted RBP12.2□□□□□ -0.46
TRIM39-204ENST00000396548 PLK5Q496M5 336 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 DNAL1Q4LDG9 190 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 HIST2H2AA3Q6FI13 130 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 FAM20CQ8IXL6 584 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 RBM12BQ8IXT5 1001 aaKnown RBP12.2□□□□□ -0.46
TRIM39-204ENST00000396548 DSELQ8IZU8 1212 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 KRT78Q8N1N4 520 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 DTWD2Q8NBA8 298 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 SH3KBP1Q96B97 665 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 ZNF717Q9BY31 904 aaPredicted RBP12.2□□□□□ -0.46
TRIM39-204ENST00000396548 AICDAQ9GZX7 198 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 CLMPQ9H6B4 373 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 UCK1Q9HA47 277 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 TMEM184CQ9NVA4 438 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 ADGRE2Q9UHX3 823 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 GIMD1P0DJR0 217 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 PRPS2P11908 318 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 FASLGP48023 281 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 RAP1GDS1P52306 607 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 POLR2JP52435 117 aaKnown RBP12.2□□□□□ -0.46
TRIM39-204ENST00000396548 ELF3P78545 371 aaPredicted RBP12.2□□□□□ -0.46
TRIM39-204ENST00000396548 SIM2Q14190 667 aaPredicted RBP12.2□□□□□ -0.46
TRIM39-204ENST00000396548 ZIC1Q15915 447 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 C11orf74Q86VG3 221 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 KYQ8NBH2 561 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.2□□□□□ -0.46
TRIM39-204ENST00000396548 AIF1LQ9BQI0 150 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 SRMSQ9H3Y6 488 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 EFCAB1Q9HAE3 211 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 MRPS30Q9NP92 439 aaKnown RBP12.2□□□□□ -0.46
TRIM39-204ENST00000396548 A0A1W2PP18 115 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 TRBC2A0A5B9 178 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 FEZF1A0PJY2 475 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 C9JVG2 144 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 LMO7DNF2Z398 122 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 EEDO75530 441 aaKnown RBP12.2□□□□□ -0.46
TRIM39-204ENST00000396548 PIAS2O75928 621 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 CLDN8P56748 225 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 VPS26BQ4G0F5 336 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 LYSMD4Q5XG99 296 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 SLC9B2Q86UD5 537 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 PAQR7Q86WK9 346 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 GKN2Q86XP6 184 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 GPATCH1Q9BRR8 931 aaKnown RBP12.2□□□□□ -0.46
TRIM39-204ENST00000396548 UCKL1Q9NWZ5 548 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 SPASTQ9UBP0 616 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 BAIAP2L1Q9UHR4 511 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 PCDHGA7Q9Y5G6 932 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 MYO15AQ9UKN7 3530 aa12.2□□□□□ -0.46
TRIM39-204ENST00000396548 PCDH15Q96QU1 1955 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 AIM2O14862 343 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 HAT1O14929 419 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 AQP9O43315 295 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 VIPP01282 170 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 PCSK2P16519 638 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 HRH2P25021 359 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 CXCR2P25025 360 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms