RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 SLC35A5Q9BS91 424 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 MCMBPQ9BTE3 642 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 ZNF232Q9UNY5 417 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 ERGIC3Q9Y282 383 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 SLC27A6Q9Y2P4 619 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 GON4LQ3T8J9 2241 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 MYL12BO14950 172 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 CBFA2T3O75081 653 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 DNTTP04053 509 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 HNRNPA1P09651 372 aaKnown RBP eCLIP6.35□□□□□ -1.39
BDNF-203ENST00000395978 HLA-FP30511 346 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 TLX1P31314 330 aaPredicted RBP6.35□□□□□ -1.39
BDNF-203ENST00000395978 FMO3P31513 532 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 VEGFBP49765 207 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 HLCSP50747 726 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 HK3P52790 923 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 SCARB2Q14108 478 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 TOMM20Q15388 145 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 NPTX1Q15818 432 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 C5orf22Q49AR2 442 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 GPAT3Q53EU6 434 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 PERM1Q5SV97 790 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 C9orf64Q5T6V5 341 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 DEPDC1Q5TB30 811 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 ANKRD26P1Q6NSI1 321 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 GALNT18Q6P9A2 607 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 GAREM2Q75VX8 874 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 OXR1Q8N573 874 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 ZNF420Q8TAQ5 688 aaPredicted RBP6.35□□□□□ -1.39
BDNF-203ENST00000395978 SLC5A11Q8WWX8 675 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 USP7Q93009 1102 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 FBXL8Q96CD0 374 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 ZNF419Q96HQ0 510 aaPredicted RBP6.35□□□□□ -1.39
BDNF-203ENST00000395978 CCDC3Q9BQI4 270 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 SEMA3GQ9NS98 782 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 SARDHQ9UL12 918 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 PCDHB14Q9Y5E9 798 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 PCDHA9Q9Y5H5 950 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 DGKBQ9Y6T7 804 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 SHROOM3Q8TF72 1996 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 A0A1W2PPW3 197 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 GBAP04062 536 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 RETP07949 1114 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 HTR1BP28222 390 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 BUD31P41223 144 aaPredicted RBP6.35□□□□□ -1.39
BDNF-203ENST00000395978 SLC16A1P53985 500 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 TAS2R50P59544 299 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 CDK6Q00534 326 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 ZNF763Q0D2J5 394 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 HSPB3Q12988 150 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 TUBA3CQ13748 450 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 DHCR24Q15392 516 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 TCEA2Q15560 299 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 TYW3Q6IPR3 259 aaKnown RBP6.35□□□□□ -1.39
BDNF-203ENST00000395978 SUSD1Q6UWL2 747 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 ENPP6Q6UWR7 440 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 FAM92BQ6ZTR7 304 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 CCDC103Q8IW40 242 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 CHERPQ8IWX8 916 aaKnown RBP6.35□□□□□ -1.39
BDNF-203ENST00000395978 SLC43A3Q8NBI5 491 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 OR10G2Q8NGC3 310 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 OR2T11Q8NH01 316 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 OR14C36Q8NHC7 312 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 VANGL1Q8TAA9 524 aaPredicted RBP6.35□□□□□ -1.39
BDNF-203ENST00000395978 BCL7CQ8WUZ0 217 aaPredicted RBP6.35□□□□□ -1.39
BDNF-203ENST00000395978 ASB11Q8WXH4 323 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 GTF2H4Q92759 462 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 ZBED6CLQ96FA7 236 aaPredicted RBP6.35□□□□□ -1.39
BDNF-203ENST00000395978 APIPQ96GX9 242 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 COPS4Q9BT78 406 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 DOCK3Q8IZD9 2030 aa6.35□□□□□ -1.39
BDNF-203ENST00000395978 TRIP12Q14669 1992 aaPredicted RBP6.35□□□□□ -1.39
BDNF-203ENST00000395978 FAM155AB1AL88 458 aaPredicted RBP6.34□□□□□ -1.39
BDNF-203ENST00000395978 OR7A17O14581 309 aa6.34□□□□□ -1.39
BDNF-203ENST00000395978 GADD45GO95257 159 aa6.34□□□□□ -1.39
BDNF-203ENST00000395978 PRAMEF12O95522 483 aa6.34□□□□□ -1.39
BDNF-203ENST00000395978 SLC16A8O95907 504 aa6.34□□□□□ -1.39
BDNF-203ENST00000395978 C9P02748 559 aa6.34□□□□□ -1.39
BDNF-203ENST00000395978 OPN1SWP03999 348 aa6.34□□□□□ -1.39
BDNF-203ENST00000395978 KRT8P05787 483 aa6.34□□□□□ -1.39
BDNF-203ENST00000395978 C1GALT1C1LP0DN25 315 aa6.34□□□□□ -1.39
BDNF-203ENST00000395978 AOAHP28039 575 aa6.34□□□□□ -1.39
BDNF-203ENST00000395978 ELK4P28324 431 aa6.34□□□□□ -1.39
BDNF-203ENST00000395978 PIK3CBP42338 1070 aa6.34□□□□□ -1.39
BDNF-203ENST00000395978 GSTM5P46439 218 aa6.34□□□□□ -1.39
BDNF-203ENST00000395978 PLA2G16P53816 162 aa6.34□□□□□ -1.39
BDNF-203ENST00000395978 IST1P53990 364 aa6.34□□□□□ -1.39
BDNF-203ENST00000395978 WDR5P61964 334 aaKnown RBP6.34□□□□□ -1.39
BDNF-203ENST00000395978 ZNF33BQ06732 778 aa6.34□□□□□ -1.39
BDNF-203ENST00000395978 BNIP3Q12983 259 aa6.34□□□□□ -1.39
BDNF-203ENST00000395978 GK3PQ14409 553 aa6.34□□□□□ -1.39
BDNF-203ENST00000395978 LAPTM4AQ15012 233 aa6.34□□□□□ -1.39
BDNF-203ENST00000395978 CCDC85BQ15834 202 aaPredicted RBP6.34□□□□□ -1.39
BDNF-203ENST00000395978 TNFAIP8L2Q6P589 184 aaPredicted RBP6.34□□□□□ -1.39
BDNF-203ENST00000395978 MSANTD1Q6ZTZ1 278 aa6.34□□□□□ -1.39
BDNF-203ENST00000395978 C16orf62Q7Z3J2 963 aa6.34□□□□□ -1.39
BDNF-203ENST00000395978 LRRTM4Q86VH4 590 aa6.34□□□□□ -1.39
BDNF-203ENST00000395978 KLHDC8BQ8IXV7 354 aa6.34□□□□□ -1.39
BDNF-203ENST00000395978 CDK20Q8IZL9 346 aa6.34□□□□□ -1.39
BDNF-203ENST00000395978 NATD1Q8N6N6 113 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms