RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 SPATA7Q9P0W8 599 aa18.6■□□□□ 0.57
LMNB1-202ENST00000395354 TMEM181Q9P2C4 612 aa18.6■□□□□ 0.57
LMNB1-202ENST00000395354 APOBEC3BQ9UH17 382 aaKnown RBP18.6■□□□□ 0.57
LMNB1-202ENST00000395354 DYRK1BQ9Y463 629 aa18.6■□□□□ 0.57
LMNB1-202ENST00000395354 MYO15AQ9UKN7 3530 aa18.6■□□□□ 0.57
LMNB1-202ENST00000395354 EP300Q09472 2414 aaPredicted RBP18.6■□□□□ 0.57
LMNB1-202ENST00000395354 SLC35G4P0C7Q5 338 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 NPPBP16860 134 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 CD22P20273 847 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 ARRB1P49407 418 aaPredicted RBP18.59■□□□□ 0.57
LMNB1-202ENST00000395354 HNRNPKP61978 463 aaKnown RBP eCLIP18.59■□□□□ 0.57
LMNB1-202ENST00000395354 AP2B1P63010 937 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 CTBSQ01459 385 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 CCNIQ14094 377 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 TCEA2Q15560 299 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 SAMD4BQ5PRF9 694 aaKnown RBP18.59■□□□□ 0.57
LMNB1-202ENST00000395354 TCEAL6Q6IPX3 200 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 SLCO4C1Q6ZQN7 724 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 TBC1D21Q8IYX1 336 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 PPFIBP2Q8ND30 876 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 TCEAL3Q969E4 200 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 CCDC124Q96CT7 223 aaKnown RBP18.59■□□□□ 0.57
LMNB1-202ENST00000395354 REPS1Q96D71 796 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 MTFMTQ96DP5 389 aaKnown RBP18.59■□□□□ 0.57
LMNB1-202ENST00000395354 ACTL8Q9H568 366 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 BRF2Q9HAW0 419 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 CCDC177Q9NQR7 707 aaPredicted RBP18.59■□□□□ 0.57
LMNB1-202ENST00000395354 ADA2Q9NZK5 511 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 NCDNQ9UBB6 729 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 STOML1Q9UBI4 398 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 SUCOQ9UBS9 1254 aaKnown RBP18.59■□□□□ 0.57
LMNB1-202ENST00000395354 L3MBTL1Q9Y468 752 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 LRP4O75096 1905 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 ADAMTS9Q9P2N4 1935 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 TP53BP1Q12888 1972 aaPredicted RBP18.59■□□□□ 0.57
LMNB1-202ENST00000395354 PRR19A6NJB7 356 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 DFNA5O60443 496 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 ZNF806P0C7X5 589 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 ENGP17813 658 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 IL12AP29459 219 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 RXRGP48443 463 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 C1orf61Q13536 156 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 LAPTM5Q13571 262 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 TLR1Q15399 786 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 PRRT3Q5FWE3 981 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 ATG9BQ674R7 924 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 DPP10Q8N608 796 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 SPDYE1Q8NFV5 336 aaPredicted RBP18.59■□□□□ 0.57
LMNB1-202ENST00000395354 CCL4L1Q8NHW4 92 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 FCRL1Q96LA6 429 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 HAUS8Q9BT25 410 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 EFCAB11Q9BUY7 163 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 TRIT1Q9H3H1 467 aaKnown RBP18.59■□□□□ 0.57
LMNB1-202ENST00000395354 GAREM1Q9H706 876 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 SPASTQ9UBP0 616 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 CD300AQ9UGN4 299 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 ANGPTL2Q9UKU9 493 aa18.59■□□□□ 0.57
LMNB1-202ENST00000395354 WDR87Q6ZQQ6 2873 aa18.58■□□□□ 0.57
LMNB1-202ENST00000395354 PROB1E7EW31 1015 aa18.58■□□□□ 0.56
LMNB1-202ENST00000395354 H0Y3Z8 333 aa18.58■□□□□ 0.56
LMNB1-202ENST00000395354 SORBS2O94875 1100 aaKnown RBP18.58■□□□□ 0.56
LMNB1-202ENST00000395354 VARSP26640 1264 aaKnown RBP18.58■□□□□ 0.56
LMNB1-202ENST00000395354 NEK2P51955 445 aa18.58■□□□□ 0.56
LMNB1-202ENST00000395354 SLC34A1Q06495 639 aa18.58■□□□□ 0.56
LMNB1-202ENST00000395354 SPEM2Q0P670 501 aa18.58■□□□□ 0.56
LMNB1-202ENST00000395354 ILF3Q12906 894 aaKnown RBP eCLIP18.58■□□□□ 0.56
LMNB1-202ENST00000395354 TRAP1Q12931 704 aaKnown RBP18.58■□□□□ 0.56
LMNB1-202ENST00000395354 CYP2A13Q16696 494 aa18.58■□□□□ 0.56
LMNB1-202ENST00000395354 PAGE2BQ5JRK9 111 aa18.58■□□□□ 0.56
LMNB1-202ENST00000395354 LCTLQ6UWM7 567 aa18.58■□□□□ 0.56
LMNB1-202ENST00000395354 LIX1Q8N485 282 aa18.58■□□□□ 0.56
LMNB1-202ENST00000395354 EFCAB3Q8N7B9 438 aa18.58■□□□□ 0.56
LMNB1-202ENST00000395354 PHC3Q8NDX5 983 aa18.58■□□□□ 0.56
LMNB1-202ENST00000395354 OR5AR1Q8NGP9 310 aa18.58■□□□□ 0.56
LMNB1-202ENST00000395354 GPBAR1Q8TDU6 330 aa18.58■□□□□ 0.56
LMNB1-202ENST00000395354 TMEM131Q92545 1883 aa18.58■□□□□ 0.56
LMNB1-202ENST00000395354 NEIL2Q969S2 332 aa18.58■□□□□ 0.56
LMNB1-202ENST00000395354 LRRC58Q96CX6 371 aa18.58■□□□□ 0.56
LMNB1-202ENST00000395354 ASB9Q96DX5 294 aa18.58■□□□□ 0.56
LMNB1-202ENST00000395354 LRRC61Q9BV99 259 aa18.58■□□□□ 0.56
LMNB1-202ENST00000395354 GTPBP2Q9BX10 602 aaKnown RBP18.58■□□□□ 0.56
LMNB1-202ENST00000395354 ABCD2Q9UBJ2 740 aa18.58■□□□□ 0.56
LMNB1-202ENST00000395354 CIDEBQ9UHD4 219 aa18.58■□□□□ 0.56
LMNB1-202ENST00000395354 KCNK6Q9Y257 313 aa18.58■□□□□ 0.56
LMNB1-202ENST00000395354 ZFHX2Q9C0A1 2572 aaPredicted RBP18.57■□□□□ 0.56
LMNB1-202ENST00000395354 A0A1B0GTQ1 180 aa18.57■□□□□ 0.56
LMNB1-202ENST00000395354 ASPDHA6ND91 283 aa18.57■□□□□ 0.56
LMNB1-202ENST00000395354 SDC3O75056 442 aa18.57■□□□□ 0.56
LMNB1-202ENST00000395354 PIAS2O75928 621 aa18.57■□□□□ 0.56
LMNB1-202ENST00000395354 BCAS2O75934 225 aaPredicted RBP18.57■□□□□ 0.56
LMNB1-202ENST00000395354 CER1O95813 267 aa18.57■□□□□ 0.56
LMNB1-202ENST00000395354 C1GALT1C1LP0DN25 315 aa18.57■□□□□ 0.56
LMNB1-202ENST00000395354 BCKDHAP12694 445 aa18.57■□□□□ 0.56
LMNB1-202ENST00000395354 AK4P27144 223 aaPredicted RBP18.57■□□□□ 0.56
LMNB1-202ENST00000395354 BNIP3Q12983 259 aa18.57■□□□□ 0.56
LMNB1-202ENST00000395354 ELOCQ15369 112 aa18.57■□□□□ 0.56
LMNB1-202ENST00000395354 SHBQ15464 509 aa18.57■□□□□ 0.56
LMNB1-202ENST00000395354 MED27Q6P2C8 311 aa18.57■□□□□ 0.56
LMNB1-202ENST00000395354 NRROSQ86YC3 692 aa18.57■□□□□ 0.56
LMNB1-202ENST00000395354 LMX1AQ8TE12 382 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms