RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 LYARQ9NX58 379 aaKnown RBP10.1□□□□□ -0.79
COL4A6-203ENST00000394872 GRXCR1A8MXD5 290 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 ITGA10O75578 1167 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 OPN1SWP03999 348 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 MATN1P21941 496 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 GKP32189 559 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 PIK3CBP42338 1070 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 MLLT6P55198 1093 aaPredicted RBP10.1□□□□□ -0.79
COL4A6-203ENST00000394872 RPL6Q02878 288 aaKnown RBP10.1□□□□□ -0.79
COL4A6-203ENST00000394872 CHRDL2Q6WN34 429 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 USP43Q70EL4 1123 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 DGLUCYQ7Z3D6 616 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 ZNF296Q8WUU4 475 aaPredicted RBP10.1□□□□□ -0.79
COL4A6-203ENST00000394872 GFM1Q96RP9 751 aaKnown RBP10.1□□□□□ -0.79
COL4A6-203ENST00000394872 BCAS3Q9H6U6 928 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 SP140LQ9H930 580 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 FETUBQ9UGM5 382 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 ZNF639Q9UID6 485 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 TRIM64A6NGJ6 449 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 EIF1AYO14602 144 aaKnown RBP10.1□□□□□ -0.79
COL4A6-203ENST00000394872 ADGRE1Q14246 886 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 ZMYND11Q15326 602 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 LACTB2Q53H82 288 aaPredicted RBP10.1□□□□□ -0.79
COL4A6-203ENST00000394872 KLHL26Q53HC5 615 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 SUSD1Q6UWL2 747 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 DCUN1D3Q8IWE4 304 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 OR4F6Q8NGB9 312 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 CNDP2Q96KP4 475 aaKnown RBP10.1□□□□□ -0.79
COL4A6-203ENST00000394872 GIN1Q9NXP7 522 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 GMEB1Q9Y692 573 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 LTN1O94822 1766 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 PRAMEF33A0A0G2JMD5 474 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 MID1O15344 667 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 PRAMEF10O60809 474 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 RPP14O95059 124 aaKnown RBP10.1□□□□□ -0.79
COL4A6-203ENST00000394872 RHOP08100 348 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 CDH1P12830 882 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 CCNOP22674 350 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 ARFRP1Q13795 201 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 GPRC6AQ5T6X5 926 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 TMPRSS9Q7Z410 1059 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 YIPF7Q8N8F6 280 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 ZNF615Q8N8J6 731 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 CMASQ8NFW8 434 aaPredicted RBP10.1□□□□□ -0.79
COL4A6-203ENST00000394872 SGIP1Q9BQI5 828 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 SLC29A3Q9BZD2 475 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 SFXN1Q9H9B4 322 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 SNTG1Q9NSN8 517 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 MALT1Q9UDY8 824 aa10.1□□□□□ -0.79
COL4A6-203ENST00000394872 MANBAO00462 879 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 LDB2O43679 373 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 APOC1P02654 83 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 CYP17A1P05093 508 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 ANXA8P13928 327 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 DUSP3P51452 185 aaPredicted RBP10.09□□□□□ -0.79
COL4A6-203ENST00000394872 CCSAPQ6IQ19 270 aaPredicted RBP10.09□□□□□ -0.79
COL4A6-203ENST00000394872 CMTR2Q8IYT2 770 aaKnown RBP10.09□□□□□ -0.79
COL4A6-203ENST00000394872 ZFP3Q96NJ6 502 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 PKP4Q99569 1192 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 CCDC59Q9P031 241 aaKnown RBP10.09□□□□□ -0.79
COL4A6-203ENST00000394872 ITM2AO43736 263 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 SNAI1O95863 264 aaPredicted RBP10.09□□□□□ -0.79
COL4A6-203ENST00000394872 H1F0P07305 194 aaKnown RBP10.09□□□□□ -0.79
COL4A6-203ENST00000394872 RORCP51449 518 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 AKR1D1P51857 326 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 MTTPP55157 894 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 ROR2Q01974 943 aaKnown RBP10.09□□□□□ -0.79
COL4A6-203ENST00000394872 EGFLAMQ63HQ2 1017 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 FIP1L1Q6UN15 594 aaKnown RBP10.09□□□□□ -0.79
COL4A6-203ENST00000394872 TMIGD1Q6UXZ0 262 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 CEACAM20Q6UY09 585 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 ZNF548Q8NEK5 533 aaPredicted RBP10.09□□□□□ -0.79
COL4A6-203ENST00000394872 OR56A1Q8NGH5 318 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 TUBGCP5Q96RT8 1024 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 FAM83CQ9BQN1 747 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 GORASP1Q9BQQ3 440 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 TMED5Q9Y3A6 229 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 COCHO43405 550 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 PRAMEF11O60813 436 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 GBAP04062 536 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 MAGEA11P43364 429 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 OR12D2P58182 307 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 RPS21P63220 83 aaKnown RBP10.09□□□□□ -0.79
COL4A6-203ENST00000394872 ELOAQ14241 798 aaKnown RBP10.09□□□□□ -0.79
COL4A6-203ENST00000394872 PAFAH1B3Q15102 231 aaKnown RBP10.09□□□□□ -0.79
COL4A6-203ENST00000394872 LGI4Q8N135 537 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 LRRC58Q96CX6 371 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 ZDHHC12Q96GR4 267 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 POLR2J2Q9GZM3 115 aaKnown RBP10.09□□□□□ -0.79
COL4A6-203ENST00000394872 TIMMDC1Q9NPL8 285 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 PAK6Q9NQU5 681 aaPredicted RBP10.09□□□□□ -0.79
COL4A6-203ENST00000394872 GALPQ9UBC7 116 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 PCDHGB1Q9Y5G3 927 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 RICTORQ6R327 1708 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 FABP12A6NFH5 140 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 ZNF99A8MXY4 864 aaPredicted RBP10.09□□□□□ -0.79
COL4A6-203ENST00000394872 TLR4O00206 839 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 GALTP07902 379 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 ACSL1P33121 698 aa10.09□□□□□ -0.79
COL4A6-203ENST00000394872 PREPP48147 710 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms