RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 PCDHGA12O60330 932 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 SOD2P04179 222 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 GPX2P18283 190 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 TMED10P49755 219 aaKnown RBP17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 WNT3P56703 355 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 B4GALNT1Q00973 533 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 CREMQ03060 361 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 FADDQ13158 208 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 UGT8Q16880 541 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 KIAA1841Q6NSI8 718 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 FAHD1Q6P587 224 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 AHSA2Q719I0 299 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 EIF3MQ7L2H7 374 aaKnown RBP17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 PAGE2Q7Z2X7 111 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 L3MBTL4Q8NA19 623 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 DCAF4L2Q8NA75 395 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 DSN1Q9H410 356 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 POLE4Q9NR33 117 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 SACM1LQ9NTJ5 587 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 XIRP2A4UGR9 3374 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 AGAP14A8MT82 685 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 NPIPB8E9PQR5 432 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 SCN2BO60939 215 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 AOAHP28039 575 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 NSG1P42857 185 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 SLC6A12P48065 614 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 ITGA1P56199 1179 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 RPP38P78345 283 aaKnown RBP17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 PPIGQ13427 754 aaKnown RBP eCLIP17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 PROX2Q3B8N5 592 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 TTC23LQ6PF05 361 aa17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 IPCEF1Q8WWN9 437 aaPredicted RBP17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 THUMPD1Q9NXG2 353 aaKnown RBP17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 SCHIP1Q9P0W5 487 aaPredicted RBP17.76■□□□□ 0.43
PCDHA1-202ENST00000394633 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 KRT87PA6NCN2 255 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 NPIPB15A6NHN6 443 aaPredicted RBP17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 CLDN24A6NM45 220 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 EFCAB9A8MZ26 197 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 UPK3BL1B0FP48 263 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 UPK3BL2E5RIL1 263 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 KDM1AO60341 852 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 EPN2O95208 641 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 FKBP9O95302 570 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 CD40LGP29965 261 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 NPRL3Q12980 569 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 CDH18Q13634 790 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 MAPK11Q15759 364 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 PTCHD3Q3KNS1 767 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 IQCCQ4KMZ1 466 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 UBE2UQ5VVX9 321 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 PDE12Q6L8Q7 609 aaKnown RBP17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 ERICH5Q6P6B1 374 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 ZNF621Q6ZSS3 439 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 SLC22A16Q86VW1 577 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 PLD3Q8IV08 490 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 ENTHD1Q8IYW4 607 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 CBARPQ8N350 705 aaPredicted RBP17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 HJURPQ8NCD3 748 aaPredicted RBP17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 HPS1Q92902 700 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 SLC35B4Q969S0 331 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 REEP1Q9H902 201 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 ZDHHC3Q9NYG2 299 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 LAG3P18627 525 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 PRPS1L1P21108 318 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 SMAD3P84022 425 aaKnown RBP17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 PLEKHG6Q3KR16 790 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 CYP2U1Q7Z449 544 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 CLECL1Q8IZS7 167 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 RHOXF1Q8NHV9 184 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 DNASE1L2Q92874 299 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 ZHX1-C8orf76Q96EF9 292 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 FCRL1Q96LA6 429 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 SLC12A9Q9BXP2 914 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 SH3BP1Q9Y3L3 701 aa17.75■□□□□ 0.43
PCDHA1-202ENST00000394633 MAGEB17A8MXT2 336 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 YY2O15391 372 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 CPSF4O95639 269 aaKnown RBP17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 ACPPP15309 386 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 PPP5CP53041 499 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 HTRA4P83105 476 aaPredicted RBP17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 FRG2Q64ET8 278 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 NEK10Q6ZWH5 1172 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 SPRED2Q7Z698 418 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 SYT12Q8IV01 421 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 TCAIMQ8N3R3 496 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 CPA6Q8N4T0 437 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 FRG2BQ96QU4 278 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 SLC22A12Q96S37 553 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 SPG21Q9NZD8 308 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 MBD1Q9UIS9 605 aaPredicted RBP17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 SLC22A14Q9Y267 594 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 EYSQ5T1H1 3165 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 ITPKAP23677 461 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 LIPAP38571 399 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 EIF2DP41214 584 aaKnown RBP17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 PPP3CCP48454 512 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 CAMK2GQ13555 558 aaPredicted RBP17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 SYT16Q17RD7 645 aa17.74■□□□□ 0.43
PCDHA1-202ENST00000394633 ATP13A5Q4VNC0 1218 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms