RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 NDUFS3O75489 264 aa14.53□□□□□ -0.08
CHMP3-202ENST00000393773 CLDN14O95500 239 aa14.53□□□□□ -0.08
CHMP3-202ENST00000393773 FTCDO95954 541 aa14.53□□□□□ -0.08
CHMP3-202ENST00000393773 IFNB1P01574 187 aa14.53□□□□□ -0.08
CHMP3-202ENST00000393773 APRTP07741 180 aa14.53□□□□□ -0.08
CHMP3-202ENST00000393773 CYC1P08574 325 aa14.53□□□□□ -0.08
CHMP3-202ENST00000393773 ETS1P14921 441 aa14.53□□□□□ -0.08
CHMP3-202ENST00000393773 STIP1P31948 543 aaKnown RBP14.53□□□□□ -0.08
CHMP3-202ENST00000393773 SMSP52788 366 aa14.53□□□□□ -0.08
CHMP3-202ENST00000393773 TUBA3CQ13748 450 aa14.53□□□□□ -0.08
CHMP3-202ENST00000393773 FAM53BQ14153 422 aa14.53□□□□□ -0.08
CHMP3-202ENST00000393773 ARHGAP19Q14CB8 494 aa14.53□□□□□ -0.08
CHMP3-202ENST00000393773 TYSND1Q2T9J0 566 aa14.53□□□□□ -0.08
CHMP3-202ENST00000393773 PCID2Q5JVF3 399 aa14.53□□□□□ -0.08
CHMP3-202ENST00000393773 ACER2Q5QJU3 275 aa14.53□□□□□ -0.08
CHMP3-202ENST00000393773 FCRLBQ6BAA4 426 aa14.53□□□□□ -0.08
CHMP3-202ENST00000393773 PLAG1Q6DJT9 500 aa14.53□□□□□ -0.08
CHMP3-202ENST00000393773 H3F3CQ6NXT2 135 aa14.53□□□□□ -0.08
CHMP3-202ENST00000393773 TUBA3EQ6PEY2 450 aa14.53□□□□□ -0.08
CHMP3-202ENST00000393773 PRSS41Q7RTY9 318 aa14.53□□□□□ -0.08
CHMP3-202ENST00000393773 RERGQ96A58 199 aaPredicted RBP14.53□□□□□ -0.08
CHMP3-202ENST00000393773 MTFMTQ96DP5 389 aaKnown RBP14.53□□□□□ -0.08
CHMP3-202ENST00000393773 SCMH1Q96GD3 660 aa14.53□□□□□ -0.08
CHMP3-202ENST00000393773 FRMD6Q96NE9 622 aa14.53□□□□□ -0.08
CHMP3-202ENST00000393773 PANX2Q96RD6 677 aa14.53□□□□□ -0.08
CHMP3-202ENST00000393773 MEMO1Q9Y316 297 aa14.53□□□□□ -0.08
CHMP3-202ENST00000393773 ZNF469Q96JG9 3925 aaPredicted RBP14.52□□□□□ -0.08
CHMP3-202ENST00000393773 CCNDBP1O95273 360 aa14.52□□□□□ -0.09
CHMP3-202ENST00000393773 MYBL2P10244 700 aa14.52□□□□□ -0.09
CHMP3-202ENST00000393773 PKMP14618 531 aaKnown RBP14.52□□□□□ -0.09
CHMP3-202ENST00000393773 NMBRP28336 390 aa14.52□□□□□ -0.09
CHMP3-202ENST00000393773 RELAQ04206 551 aa14.52□□□□□ -0.09
CHMP3-202ENST00000393773 PRDX1Q06830 199 aaKnown RBP14.52□□□□□ -0.09
CHMP3-202ENST00000393773 BTBD16Q32M84 506 aa14.52□□□□□ -0.09
CHMP3-202ENST00000393773 ANKRD20A4Q4UJ75 823 aa14.52□□□□□ -0.09
CHMP3-202ENST00000393773 SPNS3Q6ZMD2 512 aa14.52□□□□□ -0.09
CHMP3-202ENST00000393773 CPEB2Q7Z5Q1 589 aaKnown RBP14.52□□□□□ -0.09
CHMP3-202ENST00000393773 CRLF3Q8IUI8 442 aa14.52□□□□□ -0.09
CHMP3-202ENST00000393773 SIAH3Q8IW03 269 aa14.52□□□□□ -0.09
CHMP3-202ENST00000393773 CHERPQ8IWX8 916 aaKnown RBP14.52□□□□□ -0.09
CHMP3-202ENST00000393773 PPFIBP2Q8ND30 876 aa14.52□□□□□ -0.09
CHMP3-202ENST00000393773 OR9A4Q8NGU2 314 aa14.52□□□□□ -0.09
CHMP3-202ENST00000393773 FAM136AQ96C01 138 aa14.52□□□□□ -0.09
CHMP3-202ENST00000393773 C14orf79Q96F83 325 aa14.52□□□□□ -0.09
CHMP3-202ENST00000393773 HES6Q96HZ4 224 aa14.52□□□□□ -0.09
CHMP3-202ENST00000393773 TSPAN10Q9H1Z9 355 aaPredicted RBP14.52□□□□□ -0.09
CHMP3-202ENST00000393773 EIF2B3Q9NR50 452 aaKnown RBP14.52□□□□□ -0.09
CHMP3-202ENST00000393773 GALPQ9UBC7 116 aa14.52□□□□□ -0.09
CHMP3-202ENST00000393773 FAM227AF5H4B4 570 aa14.51□□□□□ -0.09
CHMP3-202ENST00000393773 H0YIG0 161 aa14.51□□□□□ -0.09
CHMP3-202ENST00000393773 TXNDC9O14530 226 aa14.51□□□□□ -0.09
CHMP3-202ENST00000393773 MAN1A2O60476 641 aa14.51□□□□□ -0.09
CHMP3-202ENST00000393773 IPO7O95373 1038 aaKnown RBP14.51□□□□□ -0.09
CHMP3-202ENST00000393773 STATHP02808 62 aa14.51□□□□□ -0.09
CHMP3-202ENST00000393773 ESRRAP11474 423 aaPredicted RBP14.51□□□□□ -0.09
CHMP3-202ENST00000393773 ST13P50502 369 aaKnown RBP14.51□□□□□ -0.09
CHMP3-202ENST00000393773 PNLIPRP1P54315 467 aa14.51□□□□□ -0.09
CHMP3-202ENST00000393773 SESN2P58004 480 aaPredicted RBP14.51□□□□□ -0.09
CHMP3-202ENST00000393773 TSTA3Q13630 321 aaPredicted RBP14.51□□□□□ -0.09
CHMP3-202ENST00000393773 KCNJ11Q14654 390 aa14.51□□□□□ -0.09
CHMP3-202ENST00000393773 ACSBG2Q5FVE4 666 aa14.51□□□□□ -0.09
CHMP3-202ENST00000393773 VN1R4Q7Z5H5 301 aa14.51□□□□□ -0.09
CHMP3-202ENST00000393773 ANKRD37Q7Z713 158 aa14.51□□□□□ -0.09
CHMP3-202ENST00000393773 CDH24Q86UP0 819 aa14.51□□□□□ -0.09
CHMP3-202ENST00000393773 SPPL2CQ8IUH8 684 aa14.51□□□□□ -0.09
CHMP3-202ENST00000393773 PLD3Q8IV08 490 aa14.51□□□□□ -0.09
CHMP3-202ENST00000393773 SYCE1Q8N0S2 351 aa14.51□□□□□ -0.09
CHMP3-202ENST00000393773 ZNF480Q8WV37 535 aa14.51□□□□□ -0.09
CHMP3-202ENST00000393773 METTL21AQ8WXB1 218 aa14.51□□□□□ -0.09
CHMP3-202ENST00000393773 PKP4Q99569 1192 aa14.51□□□□□ -0.09
CHMP3-202ENST00000393773 TRIM51Q9BSJ1 452 aa14.51□□□□□ -0.09
CHMP3-202ENST00000393773 IL22Q9GZX6 179 aa14.51□□□□□ -0.09
CHMP3-202ENST00000393773 FAM114A2Q9NRY5 505 aa14.51□□□□□ -0.09
CHMP3-202ENST00000393773 ANKRD10Q9NXR5 420 aa14.51□□□□□ -0.09
CHMP3-202ENST00000393773 MAP1AP78559 2803 aaPredicted RBP14.5□□□□□ -0.09
CHMP3-202ENST00000393773 A8MUI8 341 aa14.5□□□□□ -0.09
CHMP3-202ENST00000393773 E7ENX8 843 aa14.5□□□□□ -0.09
CHMP3-202ENST00000393773 TTI1O43156 1089 aa14.5□□□□□ -0.09
CHMP3-202ENST00000393773 NSA2O95478 260 aaKnown RBP14.5□□□□□ -0.09
CHMP3-202ENST00000393773 SLC16A8O95907 504 aa14.5□□□□□ -0.09
CHMP3-202ENST00000393773 ESR1P03372 595 aa14.5□□□□□ -0.09
CHMP3-202ENST00000393773 FMO4P31512 558 aa14.5□□□□□ -0.09
CHMP3-202ENST00000393773 CD96P40200 585 aa14.5□□□□□ -0.09
CHMP3-202ENST00000393773 AVPR1BP47901 424 aa14.5□□□□□ -0.09
CHMP3-202ENST00000393773 ADARP55265 1226 aaKnown RBP14.5□□□□□ -0.09
CHMP3-202ENST00000393773 ALDH6A1Q02252 535 aaKnown RBP14.5□□□□□ -0.09
CHMP3-202ENST00000393773 TAP2Q03519 686 aa14.5□□□□□ -0.09
CHMP3-202ENST00000393773 OR1C1Q15619 314 aa14.5□□□□□ -0.09
CHMP3-202ENST00000393773 KLHL38Q2WGJ6 581 aa14.5□□□□□ -0.09
CHMP3-202ENST00000393773 MINDY4Q4G0A6 757 aa14.5□□□□□ -0.09
CHMP3-202ENST00000393773 KRTCAP3Q53RY4 240 aa14.5□□□□□ -0.09
CHMP3-202ENST00000393773 RNF187Q5TA31 235 aaPredicted RBP14.5□□□□□ -0.09
CHMP3-202ENST00000393773 LRRC56Q8IYG6 542 aaPredicted RBP14.5□□□□□ -0.09
CHMP3-202ENST00000393773 OTUD6BQ8N6M0 293 aa14.5□□□□□ -0.09
CHMP3-202ENST00000393773 GIMAP7Q8NHV1 300 aa14.5□□□□□ -0.09
CHMP3-202ENST00000393773 MFSD3Q96ES6 412 aa14.5□□□□□ -0.09
CHMP3-202ENST00000393773 ZNF354BQ96LW1 612 aa14.5□□□□□ -0.09
CHMP3-202ENST00000393773 CYTH2Q99418 400 aa14.5□□□□□ -0.09
CHMP3-202ENST00000393773 TREX2Q9BQ50 279 aaPredicted RBP14.5□□□□□ -0.09
CHMP3-202ENST00000393773 FRMD8P1Q9BZ68 369 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms