RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 RAE1P78406 368 aaKnown RBP11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 MEF2AQ02078 507 aaPredicted RBP11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 GAS6Q14393 721 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 KRT33BQ14525 404 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 RABL3Q5HYI8 236 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 Q6ZSR6 202 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 SYT12Q8IV01 421 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 C1orf52Q8N6N3 182 aaKnown RBP11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 OR8J3Q8NGG0 315 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 OR52E1Q8NGJ3 308 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 GUCD1Q96NT3 240 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 ANKRD27Q96NW4 1050 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 ACAT2Q9BWD1 397 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 MUC13Q9H3R2 512 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 KIR3DX1Q9H7L2 352 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 C2orf42Q9NWW7 574 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 SCHIP1Q9P0W5 487 aaPredicted RBP11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 WNT16Q9UBV4 365 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 TBC1D29Q9UFV1 150 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 ADGRE2Q9UHX3 823 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 MAPRE3Q9UPY8 281 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 C15orf41Q9Y2V0 281 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 NEUROG3Q9Y4Z2 214 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 COLEC10Q9Y6Z7 277 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 DNAH14Q0VDD8 3507 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 PLXND1Q9Y4D7 1925 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 FANCMQ8IYD8 2048 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 KRBA1A5PL33 1030 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 DNAJA2O60884 412 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 ZNF217O75362 1048 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 STAMBPO95630 424 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 BAG2O95816 211 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 S100A3P33764 101 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 ASMTP46597 345 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 CCR8P51685 355 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 HNRNPFP52597 415 aaKnown RBP11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 MRPS22P82650 360 aaKnown RBP11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 MTAPQ13126 283 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 ALG11Q2TAA5 492 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 C11orf91Q3C1V1 193 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 RNF111Q6ZNA4 994 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 DHFR2Q86XF0 187 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 ZNF740Q8NDX6 193 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 OR4K1Q8NGD4 311 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 STARD8Q92502 1023 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 TSACCQ96A04 125 aaPredicted RBP11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 ZUFSPQ96AP4 578 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 SHDQ96IW2 340 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 EGLN2Q96KS0 407 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 AIF1LQ9BQI0 150 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 RHBGQ9H310 441 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 ALG2Q9H553 416 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 NT5DC2Q9H857 520 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 TRNAU1APQ9NX07 287 aaKnown RBP11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 PNMA8BQ9ULN7 279 aaPredicted RBP11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 ICKQ9UPZ9 632 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 MAN2B2Q9Y2E5 1009 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 DGKBQ9Y6T7 804 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 HEATR5BQ9P2D3 2071 aa11.01□□□□□ -0.65
SMARCAL1-203ENST00000392128 SCAMP1O15126 338 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 PSMB5P28074 263 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 NDUFS1P28331 727 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 SERPINB1P30740 379 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 TIA1P31483 386 aaKnown RBP eCLIP11□□□□□ -0.65
SMARCAL1-203ENST00000392128 GSK3BP49841 420 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 PHC1P78364 1004 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 REEP5Q00765 189 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 RHDQ02161 417 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 LIPEQ05469 1076 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 UBXN2BQ14CS0 331 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 SPATA24Q86W54 205 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 PTRH1Q86Y79 214 aaKnown RBP11□□□□□ -0.65
SMARCAL1-203ENST00000392128 BIRC7Q96CA5 298 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 DUS3LQ96G46 650 aaKnown RBP11□□□□□ -0.65
SMARCAL1-203ENST00000392128 PPM1MQ96MI6 270 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 TACO1Q9BSH4 297 aaKnown RBP11□□□□□ -0.65
SMARCAL1-203ENST00000392128 KCNH6Q9H252 994 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 RMND5AQ9H871 391 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 CUEDC1Q9NWM3 386 aaPredicted RBP11□□□□□ -0.65
SMARCAL1-203ENST00000392128 PCDHB11Q9Y5F2 797 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 TCRBV3S1A0A5B6 114 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 ERN1O75460 977 aaKnown RBP11□□□□□ -0.65
SMARCAL1-203ENST00000392128 LRATO95237 230 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 AK4P27144 223 aaPredicted RBP11□□□□□ -0.65
SMARCAL1-203ENST00000392128 ATXN3P54252 364 aaPredicted RBP11□□□□□ -0.65
SMARCAL1-203ENST00000392128 SRSF11Q05519 484 aaKnown RBP11□□□□□ -0.65
SMARCAL1-203ENST00000392128 PRDX1Q06830 199 aaKnown RBP11□□□□□ -0.65
SMARCAL1-203ENST00000392128 FXNQ16595 210 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 LRIF1Q5T3J3 769 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 GPR153Q6NV75 609 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 RD3Q7Z3Z2 195 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 VN1R5Q7Z5H4 357 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 OR13H1Q8NG92 308 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 RSRC1Q96IZ7 334 aaKnown RBP11□□□□□ -0.65
SMARCAL1-203ENST00000392128 NELL2Q99435 816 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 KCTD14Q9BQ13 255 aaPredicted RBP11□□□□□ -0.65
SMARCAL1-203ENST00000392128 GPR174Q9BXC1 333 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 TRIM8Q9BZR9 551 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 TRIM15Q9C019 465 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 TMEM168Q9H0V1 697 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms