RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 DUSP18Q8NEJ0 188 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 FLCNQ8NFG4 579 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 ST13P5Q8NFI4 369 aaPredicted RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 OR4F6Q8NGB9 312 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 OR56A4Q8NGH8 313 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 OR52H1Q8NGJ2 320 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 OR10Q1Q8NGQ4 319 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 OR13C4Q8NGS5 318 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 LHFPL5Q8TAF8 219 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 C9orf43Q8TAL5 461 aaPredicted RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 STAG3L4Q8TBR4 150 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 ZNF675Q8TD23 568 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 GPR151Q8TDV0 419 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 GIPC2Q8TF65 315 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 APOBEC4Q8WW27 367 aaKnown RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 ELMO1Q92556 727 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 HGDQ93099 445 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 POP5Q969H6 163 aaKnown RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 TRIM63Q969Q1 353 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 NCLNQ969V3 563 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 FAM162AQ96A26 154 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 ESAMQ96AP7 390 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 TESCQ96BS2 214 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 UPRTQ96BW1 309 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 ULK4Q96C45 1275 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 HMCESQ96FZ2 354 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 PCED1BQ96HM7 432 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 MS4A4AQ96JQ5 239 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 HSH2DQ96JZ2 352 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 KLHL15Q96M94 604 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 NECTIN4Q96NY8 510 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 FAM193BQ96PV7 902 aaPredicted RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 TRNT1Q96Q11 434 aaKnown RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 DCLRE1CQ96SD1 692 aaKnown RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 HBEGFQ99075 208 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 EPYCQ99645 322 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 GPR21Q99679 349 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 KCNJ15Q99712 375 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 CHCHD6Q9BRQ6 235 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 C16orf70Q9BSU1 422 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 COPS4Q9BT78 406 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 TBCDQ9BTW9 1192 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 HDHD5Q9BXW7 423 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 RSPO3Q9BXY4 272 aaPredicted RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 ZNF717Q9BY31 904 aaPredicted RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 ARHGAP39Q9C0H5 1083 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 KCNH6Q9H252 994 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 KCNN2Q9H2S1 579 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 RETREG1Q9H6L5 497 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 GOLGA2P5Q9HBQ8 144 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 SLC25A19Q9HC21 320 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 ZFP64Q9NPA5 681 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 RNF19AQ9NV58 838 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 RLIMQ9NVW2 624 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 RBM22Q9NW64 420 aaKnown RBP eCLIP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 THUMPD1Q9NXG2 353 aaKnown RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 SLCO1C1Q9NYB5 712 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 GPR83Q9NYM4 423 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 STMN3Q9NZ72 180 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 GPRC5BQ9NZH0 403 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 NUDT4Q9NZJ9 180 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 CNOT2Q9NZN8 540 aaKnown RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 PLEKHB1Q9UF11 243 aaPredicted RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 SLC23A1Q9UHI7 598 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 TMPRSS11EQ9UL52 423 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 POLHQ9Y253 713 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 BTBD3Q9Y2F9 522 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 CRYL1Q9Y2S2 319 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 HCN4Q9Y3Q4 1203 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 ZNF451Q9Y4E5 1061 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 KLF2Q9Y5W3 355 aaPredicted RBP3.34□□□□□ -1.87
TRAV39-201ENST00000390466 ALG5Q9Y673 324 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 PTCH2Q9Y6C5 1203 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 U3KQV3 271 aa3.34□□□□□ -1.87
TRAV39-201ENST00000390466 SCN5AQ14524 2016 aa3.34□□□□□ -1.88
TRAV39-201ENST00000390466 THSD7BQ9C0I4 1608 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 COL4A3Q01955 1670 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 LOC100506127A0A0U1RQW1 187 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 SMIM28A0A1B0GU29 152 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 A0A1W2PQ72 361 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 C1orf226A1L170 272 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 HYKKA2RU49 373 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 MYBPHLA2RUH7 354 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 C7orf66A4D0T2 115 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 ARRDC5A6NEK1 342 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 ZAR1LA6NP61 321 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 SMLR1H3BR10 107 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 J3KR12 359 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 M0R129 80 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 GTPBP1O00178 669 aaKnown RBP3.33□□□□□ -1.88
TRAV39-201ENST00000390466 DFFAO00273 331 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 MANBAO00462 879 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 GAPDHSO14556 408 aaPredicted RBP3.33□□□□□ -1.88
TRAV39-201ENST00000390466 TNFRSF10BO14763 440 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 SCAMP3O14828 347 aaKnown RBP3.33□□□□□ -1.88
TRAV39-201ENST00000390466 PCDH17O14917 1159 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 PER2O15055 1255 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 YY2O15391 372 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 FZD6O60353 706 aa3.33□□□□□ -1.88
TRAV39-201ENST00000390466 OR1I1O60431 355 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms