RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 CACNA1FO60840 1977 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 REREQ9P2R6 1566 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 hCG_1807616A0A1W2PRN6 198 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 F5H0A9 414 aaPredicted RBP5.72□□□□□ -1.49
RFX3-204ENST00000382004 RAD51DO75771 328 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 CSF2P04141 144 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 GNAZP19086 355 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 RGS6P49758 472 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 ZNF41P51814 821 aaPredicted RBP5.72□□□□□ -1.49
RFX3-204ENST00000382004 OAZ1P54368 228 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 ZNF616Q08AN1 781 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 ARHGAP40Q5TG30 622 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 SH3RF1Q7Z6J0 888 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 PIAS4Q8N2W9 510 aaPredicted RBP5.72□□□□□ -1.49
RFX3-204ENST00000382004 Q8N9G6 341 aaPredicted RBP5.72□□□□□ -1.49
RFX3-204ENST00000382004 SLC13A3Q8WWT9 602 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 IL25Q9H293 177 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 PTTG2Q9NZH5 202 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 HCN2Q9UL51 889 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 FZD4Q9ULV1 537 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 A6NLC8 198 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 DUXAA6NLW8 204 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 PI15O43692 258 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 CPNE6O95741 557 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 IFNA1P01562 189 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 ENGP17813 658 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 BMP8BP34820 402 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 BLKP51451 505 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 ZNF136P52737 540 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 AARDQ4LEZ3 155 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 BMP8AQ7Z5Y6 402 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 AQP11Q8NBQ7 271 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 ARL5BQ96KC2 179 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 UBQLN2Q9UHD9 624 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 FKBPLQ9UIM3 349 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 ICKQ9UPZ9 632 aa5.72□□□□□ -1.49
RFX3-204ENST00000382004 SRRM3A6NNA2 597 aaPredicted RBP5.71□□□□□ -1.49
RFX3-204ENST00000382004 SOX1O00570 391 aaPredicted RBP5.71□□□□□ -1.49
RFX3-204ENST00000382004 LILRB5O75023 590 aa5.71□□□□□ -1.49
RFX3-204ENST00000382004 RCBTB2O95199 551 aa5.71□□□□□ -1.49
RFX3-204ENST00000382004 H1F0P07305 194 aaKnown RBP5.71□□□□□ -1.49
RFX3-204ENST00000382004 CYP3A5P20815 502 aa5.71□□□□□ -1.49
RFX3-204ENST00000382004 SHMT1P34896 483 aa5.71□□□□□ -1.49
RFX3-204ENST00000382004 HSD17B12Q53GQ0 312 aa5.71□□□□□ -1.49
RFX3-204ENST00000382004 ZNF283Q8N7M2 679 aa5.71□□□□□ -1.49
RFX3-204ENST00000382004 RGMAQ96B86 450 aa5.71□□□□□ -1.49
RFX3-204ENST00000382004 PCDHAC1Q9H158 963 aa5.71□□□□□ -1.49
RFX3-204ENST00000382004 PCDHB16Q9NRJ7 776 aa5.71□□□□□ -1.49
RFX3-204ENST00000382004 BACE2Q9Y5Z0 518 aa5.71□□□□□ -1.49
RFX3-204ENST00000382004 SPATA31E1Q6ZUB1 1445 aa5.71□□□□□ -1.49
RFX3-204ENST00000382004 SOX14O95416 240 aa5.71□□□□□ -1.49
RFX3-204ENST00000382004 PRKAR1BP31321 381 aa5.71□□□□□ -1.49
RFX3-204ENST00000382004 CD97P48960 835 aa5.71□□□□□ -1.49
RFX3-204ENST00000382004 DHPSP49366 369 aaPredicted RBP5.71□□□□□ -1.49
RFX3-204ENST00000382004 PLP2Q04941 152 aa5.71□□□□□ -1.49
RFX3-204ENST00000382004 CXCL9Q07325 125 aa5.71□□□□□ -1.49
RFX3-204ENST00000382004 COL28A1Q2UY09 1125 aa5.71□□□□□ -1.49
RFX3-204ENST00000382004 SLC35F1Q5T1Q4 408 aa5.71□□□□□ -1.49
RFX3-204ENST00000382004 CARD17Q5XLA6 110 aa5.71□□□□□ -1.49
RFX3-204ENST00000382004 OTOP2Q7RTS6 562 aa5.71□□□□□ -1.49
RFX3-204ENST00000382004 TOP6BLQ8N6T0 577 aa5.71□□□□□ -1.49
RFX3-204ENST00000382004 SETD7Q8WTS6 366 aaKnown RBP5.71□□□□□ -1.49
RFX3-204ENST00000382004 TMEM246Q9BRR3 403 aa5.71□□□□□ -1.49
RFX3-204ENST00000382004 PCDHB14Q9Y5E9 798 aa5.71□□□□□ -1.49
RFX3-204ENST00000382004 CFAP20Q9Y6A4 193 aaKnown RBP5.71□□□□□ -1.49
RFX3-204ENST00000382004 AIPO00170 330 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 MRPL3P09001 348 aaKnown RBP5.71□□□□□ -1.5
RFX3-204ENST00000382004 SOX2P48431 317 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 AIF1P55008 147 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 BDH1Q02338 343 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 SLBPQ14493 270 aaKnown RBP eCLIP5.71□□□□□ -1.5
RFX3-204ENST00000382004 SEC23AQ15436 765 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 SLC15A3Q8IY34 581 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 NFKBIDQ8NI38 313 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 C9orf43Q8TAL5 461 aaPredicted RBP5.71□□□□□ -1.5
RFX3-204ENST00000382004 FRZBQ92765 325 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 MALSU1Q96EH3 234 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 HSPBAP1Q96EW2 488 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 MSLNLQ96KJ4 702 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 CDC14AQ9UNH5 594 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 PCYT1BQ9Y5K3 369 aaPredicted RBP5.71□□□□□ -1.5
RFX3-204ENST00000382004 PDLIM1O00151 329 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 MAP2K7O14733 419 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 PLD2O14939 933 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 MPPED1O15442 326 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 SULT1B1O43704 296 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 CLN5O75503 358 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 AP2A1O95782 977 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 TPSB2P20231 275 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 DLSTP36957 453 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 RPS3AP61247 264 aaKnown RBP5.71□□□□□ -1.5
RFX3-204ENST00000382004 SP3Q02447 781 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 CAPSQ13938 189 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 PON3Q15166 354 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 TPSAB1Q15661 275 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 BCL2A1Q16548 175 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 TMPPEQ6ZT21 453 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 OR14K1Q8NGZ2 314 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 GLYATL2Q8WU03 294 aa5.71□□□□□ -1.5
RFX3-204ENST00000382004 GEMIN6Q8WXD5 167 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms