RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 SLC2A2P11168 524 aaPredicted RBP8.15□□□□□ -1.1
VPS36-201ENST00000378060 CTNNB1P35222 781 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 SMSP52788 366 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 SLC10A2Q12908 348 aaPredicted RBP8.15□□□□□ -1.1
VPS36-201ENST00000378060 PPP1R8Q12972 351 aaKnown RBP8.15□□□□□ -1.1
VPS36-201ENST00000378060 CHRNA6Q15825 494 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 CARD16Q5EG05 197 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 LCN8Q6JVE9 175 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 NUDT13Q86X67 352 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 IFNLR1Q8IU57 520 aaPredicted RBP8.15□□□□□ -1.1
VPS36-201ENST00000378060 C1orf52Q8N6N3 182 aaKnown RBP8.15□□□□□ -1.1
VPS36-201ENST00000378060 C15orf40Q8WUR7 153 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 PYCR2Q96C36 320 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 ITPKCQ96DU7 683 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 ERMAPQ96PL5 475 aaPredicted RBP8.15□□□□□ -1.1
VPS36-201ENST00000378060 MND1Q9BWT6 205 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 CD244Q9BZW8 370 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 UCK2Q9BZX2 261 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 BRINP2Q9C0B6 783 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 NSUN3Q9H649 340 aaKnown RBP8.15□□□□□ -1.1
VPS36-201ENST00000378060 P2RX2Q9UBL9 471 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 UPB1Q9UBR1 384 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 TNRC18O15417 2968 aaPredicted RBP8.15□□□□□ -1.1
VPS36-201ENST00000378060 KDELR3O43731 214 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 SNAP29O95721 258 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 AGR2O95994 175 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 DNTTP04053 509 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 MAGEA6P43360 314 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 PHC1P78364 1004 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 PPP2R2BQ00005 443 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 WSCD2Q2TBF2 565 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 MS4A13Q5J8X5 152 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 CES5AQ6NT32 575 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 SLC25A24Q6NUK1 477 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 BRAT1Q6PJG6 821 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 BLOC1S3Q6QNY0 202 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 RASSF6Q6ZTQ3 369 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 TPRG1Q6ZUI0 275 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 JAZF1Q86VZ6 243 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 OR2AP1Q8NGE2 309 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 NR4A3Q92570 626 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 HSH2DQ96JZ2 352 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 IL4I1Q96RQ9 567 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 DHRS4Q9BTZ2 278 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 CRTAC1Q9NQ79 661 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 SOHLH2Q9NX45 425 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 SLC22A14Q9Y267 594 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 CARD8Q9Y2G2 431 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 ANKRD12Q6UB98 2062 aa8.15□□□□□ -1.1
VPS36-201ENST00000378060 C9IYK1 514 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 MCIDASD6RGH6 385 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 ZNF701M0R085 212 aaPredicted RBP8.15□□□□□ -1.11
VPS36-201ENST00000378060 F2P00734 622 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 F7P08709 466 aaPredicted RBP8.15□□□□□ -1.11
VPS36-201ENST00000378060 PSKH1P11801 424 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 GJA9P57773 515 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 ZNF252P-AS1Q0IIN9 211 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 SP140Q13342 867 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 SLBPQ14493 270 aaKnown RBP eCLIP8.15□□□□□ -1.11
VPS36-201ENST00000378060 PPP1R3AQ16821 1122 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 UNC50Q53HI1 259 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 UBXN11Q5T124 520 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 THOC7Q6I9Y2 204 aaKnown RBP8.15□□□□□ -1.11
VPS36-201ENST00000378060 FAM180AQ6UWF9 173 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 ADGRD2Q7Z7M1 963 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 NPAS3Q8IXF0 933 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 RNASE11Q8TAA1 199 aaKnown RBP8.15□□□□□ -1.11
VPS36-201ENST00000378060 TMEM174Q8WUU8 243 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 TRIB3Q96RU7 358 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 IL12RB2Q99665 862 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 ZSCAN5AQ9BUG6 496 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 FARSBQ9NSD9 589 aaKnown RBP8.15□□□□□ -1.11
VPS36-201ENST00000378060 TMEM45AQ9NWC5 275 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 NFKBIL1Q9UBC1 381 aaPredicted RBP8.15□□□□□ -1.11
VPS36-201ENST00000378060 CYTH4Q9UIA0 394 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 CD84Q9UIB8 345 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 BAIAP2Q9UQB8 552 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 KCTD3Q9Y597 815 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 HSPE1-MOB4S4R3N1 261 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 KIAA0100Q14667 2235 aaKnown RBP8.15□□□□□ -1.11
VPS36-201ENST00000378060 A0A096LPI6 279 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 A0A1W2PRG6 482 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 XKRYO14609 159 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 SCN2BO60939 215 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 EEDO75530 441 aaKnown RBP8.15□□□□□ -1.11
VPS36-201ENST00000378060 CLIC3O95833 236 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 ALPPP05187 535 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 CD1DP15813 335 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 ZNF30P17039 623 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 CSNK2A2P19784 350 aaPredicted RBP8.15□□□□□ -1.11
VPS36-201ENST00000378060 NT5EP21589 574 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 MPIP34949 423 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 CSKP41240 450 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 GABARAPL2P60520 117 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 KCNC4Q03721 635 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 SMCO1Q147U7 214 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 PTCHD3Q3KNS1 767 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 OR10H4Q8NGA5 316 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 OR10H5Q8NGA6 315 aa8.15□□□□□ -1.11
VPS36-201ENST00000378060 WFIKKN2Q8TEU8 576 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms