RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 OTUB2Q96DC9 234 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 PRICKLE1Q96MT3 831 aaPredicted RBP4.4□□□□□ -1.71
PMS1-202ENST00000374826 NPY6RQ99463 290 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 CHP1Q99653 195 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 TRIM62Q9BVG3 475 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 TRIM7Q9C029 511 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 C8orf33Q9H7E9 229 aaPredicted RBP4.4□□□□□ -1.71
PMS1-202ENST00000374826 RMI1Q9H9A7 625 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 FBRSL1Q9HCM7 1045 aaKnown RBP4.4□□□□□ -1.71
PMS1-202ENST00000374826 SAYSD1Q9NPB0 183 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 LTB4R2Q9NPC1 389 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 ZDHHC4Q9NPG8 344 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 TRPV5Q9NQA5 729 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 SPHK2Q9NRA0 654 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 PIGVQ9NUD9 493 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 ZNHIT6Q9NWK9 470 aaKnown RBP4.4□□□□□ -1.71
PMS1-202ENST00000374826 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.4□□□□□ -1.71
PMS1-202ENST00000374826 CNOT8Q9UFF9 292 aaKnown RBP4.4□□□□□ -1.71
PMS1-202ENST00000374826 AGO1Q9UL18 857 aaKnown RBP4.4□□□□□ -1.71
PMS1-202ENST00000374826 STAP1Q9ULZ2 295 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 SNX10Q9Y5X0 201 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 ZNF106Q9H2Y7 1883 aaKnown RBP4.4□□□□□ -1.71
PMS1-202ENST00000374826 CEP250Q9BV73 2442 aa4.4□□□□□ -1.71
PMS1-202ENST00000374826 TARSL2A2RTX5 802 aaKnown RBP4.39□□□□□ -1.71
PMS1-202ENST00000374826 HOXC11O43248 304 aaPredicted RBP4.39□□□□□ -1.71
PMS1-202ENST00000374826 KIF1CO43896 1103 aaKnown RBP4.39□□□□□ -1.71
PMS1-202ENST00000374826 CACNG3O60359 315 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 ACSL4O60488 711 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 TBL1XO60907 577 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 RTN2O75298 545 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 SOX30O94993 753 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 CBX6O95503 412 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 METTL18O95568 372 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 ADCY5O95622 1261 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 APODP05090 189 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 KRT3P12035 628 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 FCGR1AP12314 374 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 PDGFRAP16234 1089 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 NAGAP17050 411 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 SDC4P31431 198 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 HNRNPH3P31942 346 aaKnown RBP4.39□□□□□ -1.71
PMS1-202ENST00000374826 CCR1P32246 355 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 RDXP35241 583 aaKnown RBP4.39□□□□□ -1.71
PMS1-202ENST00000374826 CHKAP35790 457 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 GJC1P36383 396 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 DPP6P42658 865 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 AMTP48728 403 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 MVDP53602 400 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 GAS1P54826 345 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 GSCP56915 257 aaPredicted RBP4.39□□□□□ -1.71
PMS1-202ENST00000374826 RPL7AP62424 266 aaKnown RBP4.39□□□□□ -1.71
PMS1-202ENST00000374826 RPS24P62847 133 aaKnown RBP4.39□□□□□ -1.71
PMS1-202ENST00000374826 ARHGAP8P85298 464 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 OGDHQ02218 1023 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 TRAF2Q12933 501 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 AP5B1Q2VPB7 878 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 SLC25A52Q3SY17 297 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 TUBB8Q3ZCM7 444 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 CCDC14Q49A88 953 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 CCDC122Q5T0U0 273 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 ALKBH5Q6P6C2 394 aaKnown RBP4.39□□□□□ -1.71
PMS1-202ENST00000374826 DCUN1D2Q6PH85 259 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 ZNF329Q86UD4 541 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 FAM131BQ86XD5 332 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 UNC45BQ8IWX7 931 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 LGI2Q8N0V4 545 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 CLIP4Q8N3C7 705 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 CPXM2Q8N436 756 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 ATP6V0D2Q8N8Y2 350 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 WFDC5Q8TCV5 224 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 DDI1Q8WTU0 396 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 FAM172AQ8WUF8 416 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 NCSTNQ92542 709 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 CD101Q93033 1021 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 ARHGEF26Q96DR7 871 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 ERLEC1Q96DZ1 483 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 P2RY13Q9BPV8 354 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 ANP32EQ9BTT0 268 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 LHPPQ9H008 270 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 TKTL2Q9H0I9 626 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 THAP2Q9H0W7 228 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 LMAN1LQ9HAT1 526 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 DNAJC17Q9NVM6 304 aaKnown RBP4.39□□□□□ -1.71
PMS1-202ENST00000374826 C2orf42Q9NWW7 574 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 GRHL1Q9NZI5 618 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 WDR35Q9P2L0 1181 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 CLEC4EQ9ULY5 219 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 NENFQ9UMX5 172 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 ZNF510Q9Y2H8 683 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 PCDHGB1Q9Y5G3 927 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 BZW2Q9Y6E2 419 aaKnown RBP4.39□□□□□ -1.71
PMS1-202ENST00000374826 PCNX2A6NKB5 2137 aa4.39□□□□□ -1.71
PMS1-202ENST00000374826 GVINP1Q7Z2Y8 2422 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 USP34Q70CQ2 3546 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 TYW5A2RUC4 315 aaKnown RBP4.38□□□□□ -1.71
PMS1-202ENST00000374826 OR6C68A6NDL8 312 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 SIGLEC16A6NMB1 481 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 TMEM110-MUSTN1A8MSY1 372 aa4.38□□□□□ -1.71
PMS1-202ENST00000374826 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.38□□□□□ -1.71
PMS1-202ENST00000374826 F5H5T6 163 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms