RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 METAP1P53582 386 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 TUBA4AP68366 448 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 ELP6Q0PNE2 266 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 TSTA3Q13630 321 aaPredicted RBP11.68□□□□□ -0.54
HMGCL-202ENST00000374487 RBBP5Q15291 538 aaKnown RBP11.68□□□□□ -0.54
HMGCL-202ENST00000374487 DPY19L1Q2PZI1 675 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 CYBRD1Q53TN4 286 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 ABRAXAS1Q6UWZ7 409 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 TRAPPC5Q8IUR0 188 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 OFCC1Q8IZS5 231 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 ZNF687Q8N1G0 1237 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 FAM3CQ92520 227 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 COQ10AQ96MF6 247 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 PANX1Q96RD7 426 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 CPPED1Q9BRF8 314 aaPredicted RBP11.68□□□□□ -0.54
HMGCL-202ENST00000374487 OR2AG1Q9H205 316 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 NTN4Q9HB63 628 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 LTB4R2Q9NPC1 389 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 GPRC5BQ9NZH0 403 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 PCDHGA11Q9Y5H2 935 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 KCNE2Q9Y6J6 123 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 EDDM13A0A1B0GTR0 161 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 FAM220BPB1ANY3 271 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 H0YIV9 168 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 RECQL5O94762 991 aaPredicted RBP11.68□□□□□ -0.54
HMGCL-202ENST00000374487 RETP07949 1114 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 MYCLP1P12525 358 aaPredicted RBP11.68□□□□□ -0.54
HMGCL-202ENST00000374487 COX7A2P14406 83 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 COL9A1P20849 921 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 ITGB7P26010 798 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 RPL10P27635 214 aaKnown RBP11.68□□□□□ -0.54
HMGCL-202ENST00000374487 IMPA1P29218 277 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 GJA4P35212 333 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 CDKN2CP42773 168 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 GPR1P46091 355 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 ALDH3A2P51648 485 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 ARSFP54793 590 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 CDH15P55291 814 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 SRSF11Q05519 484 aaKnown RBP11.68□□□□□ -0.54
HMGCL-202ENST00000374487 HNRNPA1L2Q32P51 320 aaKnown RBP11.68□□□□□ -0.54
HMGCL-202ENST00000374487 ITPRIPL2Q3MIP1 535 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 KCTD21Q4G0X4 260 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 RAET1GQ6H3X3 334 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 GRHL2Q6ISB3 625 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 DOK6Q6PKX4 331 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 PATL1Q86TB9 770 aaKnown RBP11.68□□□□□ -0.54
HMGCL-202ENST00000374487 TRIM74Q86UV6 250 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 SYTL1Q8IYJ3 562 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 TMIEQ8NEW7 156 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 PJA1Q8NG27 643 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 OR7A2PQ8NGA2 310 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 OR52E4Q8NGH9 312 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 WDR20Q8TBZ3 569 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 EZH1Q92800 747 aaPredicted RBP11.68□□□□□ -0.54
HMGCL-202ENST00000374487 NELL1Q92832 810 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 DNASE1L2Q92874 299 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 NUS1Q96E22 293 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 OR4K3Q96R72 315 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 ZDHHC4Q9NPG8 344 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 DYRK4Q9NR20 520 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 DCAF13Q9NV06 445 aaKnown RBP11.68□□□□□ -0.54
HMGCL-202ENST00000374487 DNAJB9Q9UBS3 223 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 RUVBL1Q9Y265 456 aaKnown RBP11.68□□□□□ -0.54
HMGCL-202ENST00000374487 SIT1Q9Y3P8 196 aa11.68□□□□□ -0.54
HMGCL-202ENST00000374487 VPS13AQ96RL7 3174 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 A0A087WXM4 84 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 FPGTO14772 594 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 PRMT3O60678 531 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 SH3BGRLO75368 114 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 PRSS23O95084 383 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 B3GALT4O96024 378 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 SERPINA1P01009 418 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 ABHD18Q0P651 414 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 ELAVL3Q14576 367 aaKnown RBP11.67□□□□□ -0.54
HMGCL-202ENST00000374487 DUOXA1Q1HG43 343 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 ZIK1Q3SY52 487 aaPredicted RBP11.67□□□□□ -0.54
HMGCL-202ENST00000374487 C9orf64Q5T6V5 341 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 B3GNT6Q6ZMB0 384 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 Q6ZS52 159 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 ZNF621Q6ZSS3 439 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 MSANTD1Q6ZTZ1 278 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 CALHM3Q86XJ0 350 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 NETO1Q8TDF5 533 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 POP5Q969H6 163 aaKnown RBP11.67□□□□□ -0.54
HMGCL-202ENST00000374487 PPP1R16AQ96I34 528 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 REXO5Q96IC2 774 aaKnown RBP11.67□□□□□ -0.54
HMGCL-202ENST00000374487 REXO4Q9GZR2 422 aaKnown RBP11.67□□□□□ -0.54
HMGCL-202ENST00000374487 SOX17Q9H6I2 414 aaPredicted RBP11.67□□□□□ -0.54
HMGCL-202ENST00000374487 CARS2Q9HA77 564 aaKnown RBP11.67□□□□□ -0.54
HMGCL-202ENST00000374487 SPATA6Q9NWH7 488 aaPredicted RBP11.67□□□□□ -0.54
HMGCL-202ENST00000374487 MAGEB17A8MXT2 336 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 H3BSA7 217 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 K7ESM1 405 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 UPK1AO00322 258 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 MMP20O60882 483 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 C1orf105O95561 183 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 HSD3B1P14060 373 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 HSD3B2P26439 372 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 TRPC1P48995 793 aa11.67□□□□□ -0.54
HMGCL-202ENST00000374487 GALK1P51570 392 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms