RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 VANGL1Q8TAA9 524 aaPredicted RBP17.2■□□□□ 0.34
VPS26A-202ENST00000373382 SPATA17Q96L03 361 aa17.2■□□□□ 0.34
VPS26A-202ENST00000373382 MS4A12Q9NXJ0 267 aa17.2■□□□□ 0.34
VPS26A-202ENST00000373382 PCDHB1Q9Y5F3 818 aa17.2■□□□□ 0.34
VPS26A-202ENST00000373382 PNMA8CA0A1B0GUJ8 204 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 CRATP43155 626 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 TGM4P49221 684 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 CHRNA6Q15825 494 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 LRRC73Q5JTD7 316 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 LRRC66Q68CR7 880 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 MRPL10Q7Z7H8 261 aaKnown RBP17.19■□□□□ 0.34
VPS26A-202ENST00000373382 GPR156Q8NFN8 814 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 OR9Q2Q8NGE9 314 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 PARK7Q99497 189 aaKnown RBP17.19■□□□□ 0.34
VPS26A-202ENST00000373382 PTPN18Q99952 460 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 ZFYVE1Q9HBF4 777 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 MOV10Q9HCE1 1003 aaKnown RBP17.19■□□□□ 0.34
VPS26A-202ENST00000373382 TIGARQ9NQ88 270 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 PLSCR3Q9NRY6 295 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 RHCGQ9UBD6 479 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 HCSTQ9UBK5 93 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 HSPE1-MOB4S4R3N1 261 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 ADORA3P0DMS8 318 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 CORO1AP31146 461 aaKnown RBP17.19■□□□□ 0.34
VPS26A-202ENST00000373382 ATP5C1P36542 298 aaKnown RBP17.19■□□□□ 0.34
VPS26A-202ENST00000373382 GANABQ14697 944 aaKnown RBP17.19■□□□□ 0.34
VPS26A-202ENST00000373382 AGAP6Q5VW22 663 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 SLC46A3Q7Z3Q1 461 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 AGAP4Q96P64 663 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 TRNT1Q96Q11 434 aaKnown RBP17.19■□□□□ 0.34
VPS26A-202ENST00000373382 TPT1P8Q9HAU6 139 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 FZD4Q9ULV1 537 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 AP3M1Q9Y2T2 418 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 CLCA1A8K7I4 914 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 CENPXA8MT69 81 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 LAMP1P11279 417 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 PTPN6P29350 595 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 ZNF45Q02386 682 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 FAM110CQ1W6H9 321 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 PTCHD3Q3KNS1 767 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 ZMAT1Q5H9K5 638 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 LRIF1Q5T3J3 769 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 NOXRED1Q6NXP6 359 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 UBE2R2Q712K3 238 aaPredicted RBP17.19■□□□□ 0.34
VPS26A-202ENST00000373382 OR10G2Q8NGC3 310 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 LILRB4Q8NHJ6 448 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 PSORS1C1Q9UIG5 152 aa17.19■□□□□ 0.34
VPS26A-202ENST00000373382 RGS6P49758 472 aa17.18■□□□□ 0.34
VPS26A-202ENST00000373382 CDH4P55283 916 aa17.18■□□□□ 0.34
VPS26A-202ENST00000373382 ARF5P84085 180 aa17.18■□□□□ 0.34
VPS26A-202ENST00000373382 DUOXA1Q1HG43 343 aa17.18■□□□□ 0.34
VPS26A-202ENST00000373382 SPRYD7Q5W111 196 aa17.18■□□□□ 0.34
VPS26A-202ENST00000373382 NEK10Q6ZWH5 1172 aa17.18■□□□□ 0.34
VPS26A-202ENST00000373382 DNAJC22Q8N4W6 341 aa17.18■□□□□ 0.34
VPS26A-202ENST00000373382 WDR36Q8NI36 951 aaKnown RBP17.18■□□□□ 0.34
VPS26A-202ENST00000373382 PDLIM5Q96HC4 596 aaKnown RBP17.18■□□□□ 0.34
VPS26A-202ENST00000373382 IL4I1Q96RQ9 567 aa17.18■□□□□ 0.34
VPS26A-202ENST00000373382 NIPSNAP1Q9BPW8 284 aa17.18■□□□□ 0.34
VPS26A-202ENST00000373382 IL26Q9NPH9 171 aa17.18■□□□□ 0.34
VPS26A-202ENST00000373382 PAQR5Q9NXK6 330 aaPredicted RBP17.18■□□□□ 0.34
VPS26A-202ENST00000373382 PEX16Q9Y5Y5 336 aa17.18■□□□□ 0.34
VPS26A-202ENST00000373382 EIF2S1P05198 315 aaKnown RBP17.18■□□□□ 0.34
VPS26A-202ENST00000373382 CKMT1AP12532 417 aa17.18■□□□□ 0.34
VPS26A-202ENST00000373382 NFATC2Q13469 925 aa17.18■□□□□ 0.34
VPS26A-202ENST00000373382 PTOV1Q86YD1 416 aa17.18■□□□□ 0.34
VPS26A-202ENST00000373382 IL17RDQ8NFM7 739 aa17.18■□□□□ 0.34
VPS26A-202ENST00000373382 CLSTN3Q9BQT9 956 aa17.18■□□□□ 0.34
VPS26A-202ENST00000373382 TMEM246Q9BRR3 403 aa17.18■□□□□ 0.34
VPS26A-202ENST00000373382 MMP28Q9H239 520 aa17.18■□□□□ 0.34
VPS26A-202ENST00000373382 FBXL12Q9NXK8 326 aa17.18■□□□□ 0.34
VPS26A-202ENST00000373382 TRPS1Q9UHF7 1281 aa17.18■□□□□ 0.34
VPS26A-202ENST00000373382 PLXNB2O15031 1838 aa17.17■□□□□ 0.34
VPS26A-202ENST00000373382 MTX2O75431 263 aa17.17■□□□□ 0.34
VPS26A-202ENST00000373382 KLKB1P03952 638 aa17.17■□□□□ 0.34
VPS26A-202ENST00000373382 CDK1P06493 297 aa17.17■□□□□ 0.34
VPS26A-202ENST00000373382 HIST1H2AGP0C0S8 130 aaPredicted RBP17.17■□□□□ 0.34
VPS26A-202ENST00000373382 HIST1H2ADP20671 130 aa17.17■□□□□ 0.34
VPS26A-202ENST00000373382 CA8P35219 290 aa17.17■□□□□ 0.34
VPS26A-202ENST00000373382 CSTF3Q12996 717 aaKnown RBP17.17■□□□□ 0.34
VPS26A-202ENST00000373382 LRRC26Q2I0M4 334 aa17.17■□□□□ 0.34
VPS26A-202ENST00000373382 ANKS3Q6ZW76 656 aa17.17■□□□□ 0.34
VPS26A-202ENST00000373382 EIF3MQ7L2H7 374 aaKnown RBP17.17■□□□□ 0.34
VPS26A-202ENST00000373382 GALNT13Q8IUC8 556 aa17.17■□□□□ 0.34
VPS26A-202ENST00000373382 UBASH3BQ8TF42 649 aa17.17■□□□□ 0.34
VPS26A-202ENST00000373382 HIST1H2AHQ96KK5 128 aa17.17■□□□□ 0.34
VPS26A-202ENST00000373382 HIST1H2AJQ99878 128 aa17.17■□□□□ 0.34
VPS26A-202ENST00000373382 CCM2Q9BSQ5 444 aa17.17■□□□□ 0.34
VPS26A-202ENST00000373382 H2AFJQ9BTM1 129 aa17.17■□□□□ 0.34
VPS26A-202ENST00000373382 GPR62Q9BZJ7 368 aa17.17■□□□□ 0.34
VPS26A-202ENST00000373382 SNTG1Q9NSN8 517 aa17.17■□□□□ 0.34
VPS26A-202ENST00000373382 MYO16Q9Y6X6 1858 aa17.17■□□□□ 0.34
VPS26A-202ENST00000373382 EFCAB10A6NFE3 127 aa17.17■□□□□ 0.34
VPS26A-202ENST00000373382 J3KTA2 159 aa17.17■□□□□ 0.34
VPS26A-202ENST00000373382 ZNF623O75123 536 aa17.17■□□□□ 0.34
VPS26A-202ENST00000373382 GBAP04062 536 aa17.17■□□□□ 0.34
VPS26A-202ENST00000373382 CSF2P04141 144 aa17.17■□□□□ 0.34
VPS26A-202ENST00000373382 UGT2B15P54855 530 aa17.17■□□□□ 0.34
VPS26A-202ENST00000373382 DSC3Q14574 896 aa17.17■□□□□ 0.34
VPS26A-202ENST00000373382 SNAP47Q5SQN1 464 aa17.17■□□□□ 0.34
VPS26A-202ENST00000373382 C10orf62Q5T681 223 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms