RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 EPHA5P54756 1037 aa23■■□□□ 1.27
CDK9-201ENST00000373264 RPS13P62277 151 aaKnown RBP23■■□□□ 1.27
CDK9-201ENST00000373264 NEK10Q6ZWH5 1172 aa23■■□□□ 1.27
CDK9-201ENST00000373264 SERPINA11Q86U17 422 aa23■■□□□ 1.27
CDK9-201ENST00000373264 DNAJB8Q8NHS0 232 aa23■■□□□ 1.27
CDK9-201ENST00000373264 HDAC2Q92769 488 aaKnown RBP23■■□□□ 1.27
CDK9-201ENST00000373264 NXPE3Q969Y0 559 aa23■■□□□ 1.27
CDK9-201ENST00000373264 HSH2DQ96JZ2 352 aa23■■□□□ 1.27
CDK9-201ENST00000373264 NPIPB8E9PQR5 432 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 ATG13O75143 517 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 AP2A2O94973 939 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 ANXA4P09525 319 aaPredicted RBP22.99■■□□□ 1.27
CDK9-201ENST00000373264 FMO3P31513 532 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 PLA2G16P53816 162 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 CSTF3Q12996 717 aaKnown RBP22.99■■□□□ 1.27
CDK9-201ENST00000373264 ZNF691Q5VV52 312 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 KLHL35Q6PF15 583 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 ZNF852Q6ZMS4 543 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 DPPA4Q7L190 304 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 KIAA0907Q7Z7F0 614 aaPredicted RBP22.99■■□□□ 1.27
CDK9-201ENST00000373264 POF1BQ8WVV4 589 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 UBE2FQ969M7 185 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 TPD52L3Q96J77 140 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 TPT1P8Q9HAU6 139 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 CDH7Q9ULB5 785 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 EXO1Q9UQ84 846 aaKnown RBP22.99■■□□□ 1.27
CDK9-201ENST00000373264 CXorf51AA0A1B0GTR3 108 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 ZNF701M0R085 212 aaPredicted RBP22.99■■□□□ 1.27
CDK9-201ENST00000373264 SEC14L2O76054 403 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 SOD1P00441 154 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 GPX2P18283 190 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 IGFBP5P24593 272 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 KDELR2P33947 212 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 PRLHRP49683 370 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 NUP107P57740 925 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 ZNF385BQ569K4 471 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 GPR155Q7Z3F1 870 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 GPR65Q8IYL9 337 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 CFAP206Q8IYR0 622 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 C2orf73Q8N5S3 287 aaPredicted RBP22.99■■□□□ 1.27
CDK9-201ENST00000373264 OR4K1Q8NGD4 311 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 RSPRY1Q96DX4 576 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 CCM2Q9BSQ5 444 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 DUSP26Q9BV47 211 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 TMEM121BQ9BXQ6 578 aaPredicted RBP22.99■■□□□ 1.27
CDK9-201ENST00000373264 SPNS1Q9H2V7 528 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 IL1RAPQ9NPH3 570 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 SIRT5Q9NXA8 310 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 C3orf18Q9UK00 162 aa22.99■■□□□ 1.27
CDK9-201ENST00000373264 SZT2Q5T011 3432 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 SLC1A7O00341 560 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 INMTO95050 263 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 FKBP9O95302 570 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 ACPPP15309 386 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 IL5RAQ01344 420 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 DHCR24Q15392 516 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 GTF2IRD2BQ6EKJ0 949 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 OR2T5Q6IEZ7 315 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 GRHL2Q6ISB3 625 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 DHRS4L2Q6PKH6 230 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 FKBP9P1Q75LS8 142 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 GTF2IRD2Q86UP8 949 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 OR2T29Q8NH02 315 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 ZNF420Q8TAQ5 688 aaPredicted RBP22.98■■□□□ 1.27
CDK9-201ENST00000373264 ZNF480Q8WV37 535 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 CCDC138Q96M89 665 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 CCDC90BQ9GZT6 254 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 OR2AG1Q9H205 316 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 PRKAB1Q9Y478 270 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 PCYT1BQ9Y5K3 369 aaPredicted RBP22.98■■□□□ 1.27
CDK9-201ENST00000373264 BCKDKO14874 412 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 SCAMP2O15127 329 aaKnown RBP22.98■■□□□ 1.27
CDK9-201ENST00000373264 TFPTP0C1Z6 253 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 NNMTP40261 264 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 TRPC1P48995 793 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 MC1RQ01726 317 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 SRSF11Q05519 484 aaKnown RBP22.98■■□□□ 1.27
CDK9-201ENST00000373264 ARHGAP15Q53QZ3 475 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 RBM48Q5RL73 367 aaKnown RBP22.98■■□□□ 1.27
CDK9-201ENST00000373264 DDX59Q5T1V6 619 aaKnown RBP eCLIP22.98■■□□□ 1.27
CDK9-201ENST00000373264 FAM180BQ6P0A1 224 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 SHQ1Q6PI26 577 aaKnown RBP22.98■■□□□ 1.27
CDK9-201ENST00000373264 OR8J2Q8NGG1 315 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 THAP11Q96EK4 314 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 RDH12Q96NR8 316 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 SAMD4AQ9UPU9 718 aaKnown RBP22.98■■□□□ 1.27
CDK9-201ENST00000373264 RUVBL1Q9Y265 456 aaKnown RBP22.98■■□□□ 1.27
CDK9-201ENST00000373264 AP3M1Q9Y2T2 418 aa22.98■■□□□ 1.27
CDK9-201ENST00000373264 TSPAN11A1L157 253 aa22.97■■□□□ 1.27
CDK9-201ENST00000373264 TNFRSF1BP20333 461 aa22.97■■□□□ 1.27
CDK9-201ENST00000373264 CTNNB1P35222 781 aa22.97■■□□□ 1.27
CDK9-201ENST00000373264 VIPR2P41587 438 aa22.97■■□□□ 1.27
CDK9-201ENST00000373264 CLK3P49761 638 aaKnown RBP22.97■■□□□ 1.27
CDK9-201ENST00000373264 MYBPC3Q14896 1274 aa22.97■■□□□ 1.27
CDK9-201ENST00000373264 SKIV2LQ15477 1246 aaKnown RBP22.97■■□□□ 1.27
CDK9-201ENST00000373264 SMN1Q16637 294 aaKnown RBP22.97■■□□□ 1.27
CDK9-201ENST00000373264 SYTL1Q8IYJ3 562 aa22.97■■□□□ 1.27
CDK9-201ENST00000373264 PARP8Q8N3A8 854 aa22.97■■□□□ 1.27
CDK9-201ENST00000373264 TBC1D15Q8TC07 691 aa22.97■■□□□ 1.27
CDK9-201ENST00000373264 SH3BP4Q9P0V3 963 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms