RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 VPS29Q9UBQ0 182 aa18.52■□□□□ 0.56
TMEM53-202ENST00000372237 TMPRSS11EQ9UL52 423 aa18.52■□□□□ 0.56
TMEM53-202ENST00000372237 ERVK-11Q9UQG0 969 aa18.52■□□□□ 0.56
TMEM53-202ENST00000372237 SPINT3P49223 89 aa18.52■□□□□ 0.56
TMEM53-202ENST00000372237 CSTF3Q12996 717 aaKnown RBP18.52■□□□□ 0.56
TMEM53-202ENST00000372237 LIPJQ5W064 366 aa18.52■□□□□ 0.56
TMEM53-202ENST00000372237 ZDHHC20Q5W0Z9 365 aa18.52■□□□□ 0.56
TMEM53-202ENST00000372237 PDE12Q6L8Q7 609 aaKnown RBP18.52■□□□□ 0.56
TMEM53-202ENST00000372237 LINC00299Q6ZSB3 139 aa18.52■□□□□ 0.56
TMEM53-202ENST00000372237 ANKRD33Q7Z3H0 272 aa18.52■□□□□ 0.56
TMEM53-202ENST00000372237 CPXM2Q8N436 756 aa18.52■□□□□ 0.56
TMEM53-202ENST00000372237 ALPK1Q96QP1 1244 aa18.52■□□□□ 0.56
TMEM53-202ENST00000372237 PCDH12Q9NPG4 1184 aa18.52■□□□□ 0.56
TMEM53-202ENST00000372237 OBSL1O75147 1896 aa18.52■□□□□ 0.56
TMEM53-202ENST00000372237 ATP6V1G1O75348 118 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 CCL5P13501 91 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 GABRR2P28476 465 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 HPCAL1P37235 193 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 ITGA1P56199 1179 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 MVKQ03426 396 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 RAB33AQ14088 237 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 XKR6Q5GH73 641 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 C22orf39Q6P5X5 142 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.51■□□□□ 0.55
TMEM53-202ENST00000372237 HTR3DQ70Z44 454 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 DEFB128Q7Z7B8 93 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 ADCK1Q86TW2 530 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 AUTS2Q8WXX7 1259 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 ELMO1Q92556 727 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 TMEM169Q96HH4 297 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 ZNF300Q96RE9 604 aaPredicted RBP18.51■□□□□ 0.55
TMEM53-202ENST00000372237 NEURL2Q9BR09 285 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 BRD9Q9H8M2 597 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 TPT1P8Q9HAU6 139 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 ACOT13Q9NPJ3 140 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 CD22P20273 847 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 EFNA1P20827 205 aaPredicted RBP18.51■□□□□ 0.55
TMEM53-202ENST00000372237 ACSM2AQ08AH3 577 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 OXA1LQ15070 435 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 PROX2Q3B8N5 592 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 PERM1Q5SV97 790 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 ACSM2BQ68CK6 577 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 GPR155Q7Z3F1 870 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 TCEAL8Q8IYN2 117 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 TAMM41Q96BW9 452 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 MROQ9BYG7 248 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 PRM3Q9NNZ6 103 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 FAM8A1Q9UBU6 413 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 B4GALT6Q9UBX8 382 aa18.51■□□□□ 0.55
TMEM53-202ENST00000372237 RUVBL1Q9Y265 456 aaKnown RBP18.51■□□□□ 0.55
TMEM53-202ENST00000372237 KPNA5O15131 536 aa18.5■□□□□ 0.55
TMEM53-202ENST00000372237 SERPINB7O75635 380 aa18.5■□□□□ 0.55
TMEM53-202ENST00000372237 LAMP1P11279 417 aa18.5■□□□□ 0.55
TMEM53-202ENST00000372237 KRT20P35900 424 aa18.5■□□□□ 0.55
TMEM53-202ENST00000372237 SFSWAPQ12872 951 aaKnown RBP18.5■□□□□ 0.55
TMEM53-202ENST00000372237 NPRL3Q12980 569 aa18.5■□□□□ 0.55
TMEM53-202ENST00000372237 VEZF1Q14119 521 aa18.5■□□□□ 0.55
TMEM53-202ENST00000372237 SF1Q15637 639 aaKnown RBP18.5■□□□□ 0.55
TMEM53-202ENST00000372237 PAGE2BQ5JRK9 111 aa18.5■□□□□ 0.55
TMEM53-202ENST00000372237 WDR20Q8TBZ3 569 aa18.5■□□□□ 0.55
TMEM53-202ENST00000372237 UBE2FQ969M7 185 aa18.5■□□□□ 0.55
TMEM53-202ENST00000372237 SH3KBP1Q96B97 665 aa18.5■□□□□ 0.55
TMEM53-202ENST00000372237 DUSP26Q9BV47 211 aa18.5■□□□□ 0.55
TMEM53-202ENST00000372237 PCDHB11Q9Y5F2 797 aa18.5■□□□□ 0.55
TMEM53-202ENST00000372237 TMEM247A6NEH6 219 aa18.5■□□□□ 0.55
TMEM53-202ENST00000372237 YY2O15391 372 aa18.5■□□□□ 0.55
TMEM53-202ENST00000372237 UGDHO60701 494 aa18.5■□□□□ 0.55
TMEM53-202ENST00000372237 NCS1P62166 190 aa18.5■□□□□ 0.55
TMEM53-202ENST00000372237 RPP38P78345 283 aaKnown RBP18.5■□□□□ 0.55
TMEM53-202ENST00000372237 CAMK2GQ13555 558 aaPredicted RBP18.5■□□□□ 0.55
TMEM53-202ENST00000372237 SLC39A5Q6ZMH5 540 aa18.5■□□□□ 0.55
TMEM53-202ENST00000372237 DPY19L3Q6ZPD9 716 aa18.5■□□□□ 0.55
TMEM53-202ENST00000372237 AHSA2Q719I0 299 aa18.5■□□□□ 0.55
TMEM53-202ENST00000372237 PRSS48Q7RTY5 328 aa18.5■□□□□ 0.55
TMEM53-202ENST00000372237 HS6ST3Q8IZP7 471 aa18.5■□□□□ 0.55
TMEM53-202ENST00000372237 CMTM8Q8IZV2 173 aa18.5■□□□□ 0.55
TMEM53-202ENST00000372237 MRPS31Q92665 395 aaKnown RBP18.5■□□□□ 0.55
TMEM53-202ENST00000372237 SIRT5Q9NXA8 310 aa18.5■□□□□ 0.55
TMEM53-202ENST00000372237 FZD4Q9ULV1 537 aa18.5■□□□□ 0.55
TMEM53-202ENST00000372237 E7EQ34 232 aa18.49■□□□□ 0.55
TMEM53-202ENST00000372237 MRPS14O60783 128 aaKnown RBP18.49■□□□□ 0.55
TMEM53-202ENST00000372237 MYO1DO94832 1006 aa18.49■□□□□ 0.55
TMEM53-202ENST00000372237 C9P02748 559 aa18.49■□□□□ 0.55
TMEM53-202ENST00000372237 MNX1P50219 401 aaPredicted RBP18.49■□□□□ 0.55
TMEM53-202ENST00000372237 TLE2Q04725 743 aa18.49■□□□□ 0.55
TMEM53-202ENST00000372237 ZNF33BQ06732 778 aa18.49■□□□□ 0.55
TMEM53-202ENST00000372237 TMEM236Q5W0B7 351 aa18.49■□□□□ 0.55
TMEM53-202ENST00000372237 CCDC71Q8IV32 467 aaPredicted RBP18.49■□□□□ 0.55
TMEM53-202ENST00000372237 SYNPOQ8N3V7 929 aa18.49■□□□□ 0.55
TMEM53-202ENST00000372237 DYNC2LI1Q8TCX1 351 aa18.49■□□□□ 0.55
TMEM53-202ENST00000372237 HS3ST2Q9Y278 367 aa18.49■□□□□ 0.55
TMEM53-202ENST00000372237 BTBD3Q9Y2F9 522 aa18.49■□□□□ 0.55
TMEM53-202ENST00000372237 URODP06132 367 aa18.49■□□□□ 0.55
TMEM53-202ENST00000372237 NUDT7P0C024 238 aa18.49■□□□□ 0.55
TMEM53-202ENST00000372237 TPP2P29144 1249 aaPredicted RBP18.49■□□□□ 0.55
TMEM53-202ENST00000372237 HLA-FP30511 346 aa18.49■□□□□ 0.55
TMEM53-202ENST00000372237 CREMQ03060 361 aa18.49■□□□□ 0.55
TMEM53-202ENST00000372237 KCNC3Q14003 757 aa18.49■□□□□ 0.55
TMEM53-202ENST00000372237 INAQ16352 499 aa18.49■□□□□ 0.55
TMEM53-202ENST00000372237 FAHD1Q6P587 224 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms