RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 DMXL2Q8TDJ6 3036 aa6.8□□□□□ -1.32
USP1-202ENST00000371146 FAM221BA6H8Z2 402 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 TMEM114B3SHH9 223 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 AGPSO00116 658 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 CDX4O14627 284 aaPredicted RBP6.79□□□□□ -1.32
USP1-202ENST00000371146 NDUFS4O43181 175 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 NRP2O60462 931 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 EPOP01588 193 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 CDH1P12830 882 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 PTGIRP43119 386 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 CCR5P51681 352 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 YPEL5P62699 121 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 PPP2R2AP63151 447 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 CD83Q01151 205 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 OCRLQ01968 901 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 GALNT1Q10472 559 aaPredicted RBP6.79□□□□□ -1.32
USP1-202ENST00000371146 OVGP1Q12889 678 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 FASTKQ14296 549 aaKnown RBP6.79□□□□□ -1.32
USP1-202ENST00000371146 KCNJ11Q14654 390 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 STK11Q15831 433 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 MOGQ16653 247 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 SPANXN3Q5MJ09 141 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 DENND5AQ6IQ26 1287 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 NUDCD3Q8IVD9 361 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 NAT8LQ8N9F0 302 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 C7orf57Q8NEG2 295 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 FNDC8Q8TC99 324 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 ABTB1Q969K4 478 aaPredicted RBP6.79□□□□□ -1.32
USP1-202ENST00000371146 DNAJA3Q96EY1 480 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 TSPAN17Q96FV3 270 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 ZDHHC12Q96GR4 267 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 GAL3ST4Q96RP7 486 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 SERINC2Q96SA4 455 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 CENPKQ9BS16 269 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 NAT9Q9BTE0 207 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 AARSD1Q9BTE6 412 aaKnown RBP6.79□□□□□ -1.32
USP1-202ENST00000371146 SOX17Q9H6I2 414 aaPredicted RBP6.79□□□□□ -1.32
USP1-202ENST00000371146 PDE7BQ9NP56 450 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 TIMMDC1Q9NPL8 285 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 NLE1Q9NVX2 485 aaPredicted RBP6.79□□□□□ -1.32
USP1-202ENST00000371146 IFT80Q9P2H3 777 aaPredicted RBP6.79□□□□□ -1.32
USP1-202ENST00000371146 OPTCQ9UBM4 332 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 SLC12A4Q9UP95 1085 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 NEU3Q9UQ49 428 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 RAXQ9Y2V3 346 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 LOC285095A0A1B0GVY8 99 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 FAM227AF5H4B4 570 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 FBP2O00757 339 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 SLC7A4O43246 635 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 JRKO75564 520 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 EBLN1P0CF75 366 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 C8orf89P0DMQ9 161 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 NME1P15531 152 aaKnown RBP6.79□□□□□ -1.32
USP1-202ENST00000371146 RNF144AP50876 292 aaPredicted RBP6.79□□□□□ -1.32
USP1-202ENST00000371146 CDKN2DP55273 166 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 CDK16Q00536 496 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 SIX1Q15475 284 aaPredicted RBP6.79□□□□□ -1.32
USP1-202ENST00000371146 HIST2H2ACQ16777 129 aaPredicted RBP6.79□□□□□ -1.32
USP1-202ENST00000371146 HIST2H2AA3Q6FI13 130 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 Q6ZNX1 250 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 RBM44Q6ZP01 1051 aaKnown RBP6.79□□□□□ -1.32
USP1-202ENST00000371146 TMEM26Q6ZUK4 368 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 CILP2Q8IUL8 1156 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 SFRP1Q8N474 314 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 SNIP1Q8TAD8 396 aaKnown RBP6.79□□□□□ -1.32
USP1-202ENST00000371146 METTL6Q8TCB7 284 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 HM13Q8TCT9 377 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 NETO1Q8TDF5 533 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 USP7Q93009 1102 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 GBP5Q96PP8 586 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 OCIAD1Q9NX40 245 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 SH3BP4Q9P0V3 963 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 KCND3Q9UK17 655 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 SNX7Q9UNH6 387 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 HS3ST3A1Q9Y663 406 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 A0A0A6YYC8 382 aaPredicted RBP6.79□□□□□ -1.32
USP1-202ENST00000371146 IGHV3-20A0A0C4DH32 117 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 C1QTNF9BB2RNN3 333 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 HNRNPCL2B2RXH8 293 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 I3L1I5 382 aaPredicted RBP6.79□□□□□ -1.32
USP1-202ENST00000371146 PLD2O14939 933 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 TNFSF14O43557 240 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 HNRNPCL1O60812 293 aaKnown RBP6.79□□□□□ -1.32
USP1-202ENST00000371146 C1QTNF9P0C862 333 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 CALB2P22676 271 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 ITGA3P26006 1051 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 RPL26P61254 145 aaKnown RBP6.79□□□□□ -1.32
USP1-202ENST00000371146 OCA2Q04671 838 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 CDC16Q13042 620 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 EIF4EBP2Q13542 120 aaPredicted RBP6.79□□□□□ -1.32
USP1-202ENST00000371146 CYLC2Q14093 348 aaPredicted RBP6.79□□□□□ -1.32
USP1-202ENST00000371146 C16orf72Q14CZ0 275 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 PHKG1Q16816 387 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 ATP1A1-AS1Q5TC04 95 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 C4orf22Q6V702 233 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 KYAT3Q6YP21 454 aaKnown RBP6.79□□□□□ -1.32
USP1-202ENST00000371146 RFPL4BQ6ZWI9 263 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 TEX26Q8N6G2 289 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 ZNF740Q8NDX6 193 aa6.79□□□□□ -1.32
USP1-202ENST00000371146 HCAR2Q8TDS4 363 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms