RNA–Protein interactions for RNA: ENST00000370086.7

SSR4-203, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR4, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-203ENST00000370086 RBBP8Q99708 897 aa13.78□□□□□ -0.2
SSR4-203ENST00000370086 CPNE1Q99829 537 aa13.78□□□□□ -0.2
SSR4-203ENST00000370086 SLC25A23Q9BV35 468 aa13.78□□□□□ -0.2
SSR4-203ENST00000370086 POPDC3Q9HBV1 291 aa13.78□□□□□ -0.2
SSR4-203ENST00000370086 NOVA2Q9UNW9 492 aaKnown RBP13.78□□□□□ -0.2
SSR4-203ENST00000370086 MRPS2Q9Y399 296 aaKnown RBP13.78□□□□□ -0.2
SSR4-203ENST00000370086 DOCK10Q96BY6 2186 aa13.78□□□□□ -0.2
SSR4-203ENST00000370086 KCNE1BA0A087WTH5 132 aa13.77□□□□□ -0.21
SSR4-203ENST00000370086 PABPN1LA6NDY0 278 aaKnown RBP13.77□□□□□ -0.21
SSR4-203ENST00000370086 A6NL46 340 aa13.77□□□□□ -0.21
SSR4-203ENST00000370086 FOXS1O43638 330 aa13.77□□□□□ -0.21
SSR4-203ENST00000370086 FAM155BO75949 473 aa13.77□□□□□ -0.21
SSR4-203ENST00000370086 CDH1P12830 882 aa13.77□□□□□ -0.21
SSR4-203ENST00000370086 GP5P40197 560 aa13.77□□□□□ -0.21
SSR4-203ENST00000370086 RPS15AP62244 130 aaKnown RBP13.77□□□□□ -0.21
SSR4-203ENST00000370086 POU4F1Q01851 419 aa13.77□□□□□ -0.21
SSR4-203ENST00000370086 KBTBD12Q3ZCT8 623 aa13.77□□□□□ -0.21
SSR4-203ENST00000370086 GARNL3Q5VVW2 1013 aa13.77□□□□□ -0.21
SSR4-203ENST00000370086 MMGT1Q8N4V1 131 aa13.77□□□□□ -0.21
SSR4-203ENST00000370086 NOA1Q8NC60 698 aaKnown RBP13.77□□□□□ -0.21
SSR4-203ENST00000370086 STT3BQ8TCJ2 826 aa13.77□□□□□ -0.21
SSR4-203ENST00000370086 FBF1Q8TES7 1133 aa13.77□□□□□ -0.21
SSR4-203ENST00000370086 IP6K3Q96PC2 410 aa13.77□□□□□ -0.21
SSR4-203ENST00000370086 GPR22Q99680 433 aa13.77□□□□□ -0.21
SSR4-203ENST00000370086 MACROD1Q9BQ69 325 aa13.77□□□□□ -0.21
SSR4-203ENST00000370086 HAUS8Q9BT25 410 aa13.77□□□□□ -0.21
SSR4-203ENST00000370086 NUDT9Q9BW91 350 aa13.77□□□□□ -0.21
SSR4-203ENST00000370086 TRIM4Q9C037 500 aa13.77□□□□□ -0.21
SSR4-203ENST00000370086 UNKQ9C0B0 810 aaKnown RBP13.77□□□□□ -0.21
SSR4-203ENST00000370086 GPAMQ9HCL2 828 aa13.77□□□□□ -0.21
SSR4-203ENST00000370086 P4HTMQ9NXG6 502 aa13.77□□□□□ -0.21
SSR4-203ENST00000370086 ANAPC2Q9UJX6 822 aa13.77□□□□□ -0.21
SSR4-203ENST00000370086 OARD1Q9Y530 152 aa13.77□□□□□ -0.21
SSR4-203ENST00000370086 PCDHGA9Q9Y5G4 932 aaKnown RBP13.77□□□□□ -0.21
SSR4-203ENST00000370086 HELZ2Q9BYK8 2649 aaKnown RBP13.77□□□□□ -0.21
SSR4-203ENST00000370086 TENM4Q6N022 2769 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 IGLV3-12A0A075B6K2 115 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 A0A0A6YYC8 382 aaPredicted RBP13.76□□□□□ -0.21
SSR4-203ENST00000370086 I3L1I5 382 aaPredicted RBP13.76□□□□□ -0.21
SSR4-203ENST00000370086 PEX12O00623 359 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 TXNDC9O14530 226 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 SOCS6O14544 535 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 FFAR3O14843 346 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 GPR42O15529 346 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 PHGDHO43175 533 aaKnown RBP13.76□□□□□ -0.21
SSR4-203ENST00000370086 ZGLP1P0C6A0 271 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 FBLP22087 321 aaKnown RBP13.76□□□□□ -0.21
SSR4-203ENST00000370086 MMP11P24347 488 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 SLC26A3P40879 764 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 BCL6P41182 706 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 PGDP52209 483 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 SLC12A2P55011 1212 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 RRADP55042 308 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 MEF2AQ02078 507 aaPredicted RBP13.76□□□□□ -0.21
SSR4-203ENST00000370086 ILF2Q12905 390 aaKnown RBP13.76□□□□□ -0.21
SSR4-203ENST00000370086 KLRB1Q12918 225 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 USP10Q14694 798 aaKnown RBP13.76□□□□□ -0.21
SSR4-203ENST00000370086 EFTUD2Q15029 972 aaKnown RBP eCLIP13.76□□□□□ -0.213e-6■■■■■ 41.9
SSR4-203ENST00000370086 TSNQ15631 228 aaKnown RBP13.76□□□□□ -0.21
SSR4-203ENST00000370086 VWA2Q5GFL6 755 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 DCAF10Q5QP82 559 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 CATSPEREQ5SY80 951 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 LAPTM4BQ86VI4 370 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 CTAGE3PQ8IX95 158 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 SPATA6LQ8N4H0 392 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 PPM1NQ8N819 430 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 AMER3Q8N944 861 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 ABHD11Q8NFV4 315 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 OR4K1Q8NGD4 311 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 ATL1Q8WXF7 558 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 MIEF2Q96C03 454 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 TM4SF19Q96DZ7 209 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 MVB12AQ96EY5 273 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 FER1L6-AS2Q96M78 137 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 MESP1Q9BRJ9 268 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 TXNDC16Q9P2K2 825 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 CTNNAL1Q9UBT7 734 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 ZNF282Q9UDV7 671 aaPredicted RBP13.76□□□□□ -0.21
SSR4-203ENST00000370086 DMGDHQ9UI17 866 aaKnown RBP13.76□□□□□ -0.21
SSR4-203ENST00000370086 NXT1Q9UKK6 140 aaKnown RBP13.76□□□□□ -0.21
SSR4-203ENST00000370086 HS3ST3B1Q9Y662 390 aa13.76□□□□□ -0.21
SSR4-203ENST00000370086 AGPSO00116 658 aa13.75□□□□□ -0.21
SSR4-203ENST00000370086 GMPRP36959 345 aa13.75□□□□□ -0.21
SSR4-203ENST00000370086 CASRP41180 1078 aa13.75□□□□□ -0.21
SSR4-203ENST00000370086 CDKL1Q00532 357 aa13.75□□□□□ -0.21
SSR4-203ENST00000370086 OCA2Q04671 838 aa13.75□□□□□ -0.21
SSR4-203ENST00000370086 TLE1Q04724 770 aa13.75□□□□□ -0.21
SSR4-203ENST00000370086 KLC1Q07866 573 aa13.75□□□□□ -0.21
SSR4-203ENST00000370086 RAPSNQ13702 412 aa13.75□□□□□ -0.21
SSR4-203ENST00000370086 ZKSCAN8Q15776 578 aaPredicted RBP13.75□□□□□ -0.21
SSR4-203ENST00000370086 SYT16Q17RD7 645 aa13.75□□□□□ -0.21
SSR4-203ENST00000370086 C18orf21Q32NC0 220 aaPredicted RBP13.75□□□□□ -0.21
SSR4-203ENST00000370086 UBAP2Q5T6F2 1119 aaKnown RBP13.75□□□□□ -0.21
SSR4-203ENST00000370086 GRTP1Q5TC63 336 aa13.75□□□□□ -0.21
SSR4-203ENST00000370086 KIRREL2Q6UWL6 708 aa13.75□□□□□ -0.21
SSR4-203ENST00000370086 PRSS41Q7RTY9 318 aa13.75□□□□□ -0.21
SSR4-203ENST00000370086 THOC6Q86W42 341 aaKnown RBP13.75□□□□□ -0.21
SSR4-203ENST00000370086 PRSS58Q8IYP2 241 aa13.75□□□□□ -0.21
SSR4-203ENST00000370086 SHISA5Q8N114 240 aa13.75□□□□□ -0.21
SSR4-203ENST00000370086 NEIL2Q969S2 332 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms