RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 RGCCQ9H4X1 137 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 DNAAF2Q9NVR5 837 aaKnown RBP6.89□□□□□ -1.31
SPTA1-201ENST00000368147 TRAF6Q9Y4K3 522 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 INSL5Q9Y5Q6 135 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 A0A1B0GVT2 93 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 C5orf60A6NFR6 353 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 E7ESA3 106 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 ERI3O43414 337 aaKnown RBP6.89□□□□□ -1.31
SPTA1-201ENST00000368147 RPP14O95059 124 aaKnown RBP6.89□□□□□ -1.31
SPTA1-201ENST00000368147 SLC2A5P22732 501 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 ATP5A1P25705 553 aaKnown RBP6.89□□□□□ -1.31
SPTA1-201ENST00000368147 NR1H2P55055 460 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 SLC34A1Q06495 639 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 NNATQ16517 81 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 SLC10A6Q3KNW5 377 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 HMGN2P46Q86SG4 172 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 TREML1Q86YW5 311 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 SPPL2CQ8IUH8 684 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 BAP1Q92560 729 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 SLC35G5Q96KT7 338 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 BCAS3Q9H6U6 928 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 PDP1Q9P0J1 537 aaPredicted RBP6.89□□□□□ -1.31
SPTA1-201ENST00000368147 A0A1W2PPM1 405 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 ATE1O95260 518 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 ADH1BP00325 375 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 VIPR2P41587 438 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 RAB12Q6IQ22 244 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 C3orf33Q6P1S2 294 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 MTFR2Q6P444 385 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 GTF2H5Q6ZYL4 71 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 PRICKLE1Q96MT3 831 aaPredicted RBP6.89□□□□□ -1.31
SPTA1-201ENST00000368147 KREMEN1Q96MU8 473 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 TEFMQ96QE5 360 aaKnown RBP6.89□□□□□ -1.31
SPTA1-201ENST00000368147 C12orf65Q9H3J6 166 aaKnown RBP6.89□□□□□ -1.31
SPTA1-201ENST00000368147 CRTAC1Q9NQ79 661 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 VNN3Q9NY84 501 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 NKIRAS2Q9NYR9 191 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 ZNF180Q9UJW8 692 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 TIMM8BQ9Y5J9 83 aaPredicted RBP6.89□□□□□ -1.31
SPTA1-201ENST00000368147 JUNP05412 331 aaKnown RBP6.89□□□□□ -1.31
SPTA1-201ENST00000368147 HCKP08631 526 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 CDK7P50613 346 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 BNIP2Q12982 314 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 RAB39AQ14964 217 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 SHISA6Q6ZSJ9 500 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 ZNF627Q7L945 461 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 LYSMD3Q7Z3D4 306 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 CUZD1Q86UP6 607 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 RANBP3LQ86VV4 465 aaPredicted RBP6.89□□□□□ -1.31
SPTA1-201ENST00000368147 FAM47BQ8NA70 645 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 THAP6Q8TBB0 222 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 SCGB1C1Q8TD33 95 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 NECAB3Q96P71 396 aaPredicted RBP6.89□□□□□ -1.31
SPTA1-201ENST00000368147 GRHL1Q9NZI5 618 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 CD207Q9UJ71 328 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 TESMINQ9Y4I5 508 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 OR1A2Q9Y585 309 aa6.89□□□□□ -1.31
SPTA1-201ENST00000368147 NPIPA5E9PKD4 350 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 IFNA17P01571 189 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 COX4I1P13073 169 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 CFL1P23528 166 aaKnown RBP6.88□□□□□ -1.31
SPTA1-201ENST00000368147 ZNF792Q3KQV3 632 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 C4orf17Q53FE4 359 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 TPGS2Q68CL5 300 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 ZC3H14Q6PJT7 736 aaKnown RBP6.88□□□□□ -1.31
SPTA1-201ENST00000368147 XKRXQ6PP77 449 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 PXYLP1Q8TE99 480 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 RCN3Q96D15 328 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 SLC25A23Q9BV35 468 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 IFT27Q9BW83 186 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 LMAN1LQ9HAT1 526 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 SPAG4Q9NPE6 437 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 NPIPA1Q9UND3 350 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 TLR6Q9Y2C9 796 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 FAM221BA6H8Z2 402 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 C1orf196B1AJZ1 125 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 CASKO14936 926 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 PDPK1O15530 556 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 SCGB1D2O95969 90 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 ZNF20P17024 532 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 MAGP20916 626 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 FBLP22087 321 aaKnown RBP6.88□□□□□ -1.31
SPTA1-201ENST00000368147 GSTM2P28161 218 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 CD40LGP29965 261 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 S100A7P31151 101 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 RFC2P35250 354 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 STK19P49842 368 aaPredicted RBP6.88□□□□□ -1.31
SPTA1-201ENST00000368147 CDK16Q00536 496 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 MEF2AQ02078 507 aaPredicted RBP6.88□□□□□ -1.31
SPTA1-201ENST00000368147 SLBPQ14493 270 aaKnown RBP eCLIP6.88□□□□□ -1.31
SPTA1-201ENST00000368147 MAD2L1BPQ15013 274 aaPredicted RBP6.88□□□□□ -1.31
SPTA1-201ENST00000368147 TAF1AQ15573 450 aaPredicted RBP6.88□□□□□ -1.31
SPTA1-201ENST00000368147 PDK4Q16654 411 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 PHF13Q86YI8 300 aaPredicted RBP6.88□□□□□ -1.31
SPTA1-201ENST00000368147 PROKR2Q8NFJ6 384 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 FAM3CQ92520 227 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 ZNF570Q96NI8 536 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 GPR88Q9GZN0 384 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 GDF3Q9NR23 364 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 CHD2O14647 1828 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms