RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 CSNK1A1LQ8N752 337 aa13.76□□□□□ -0.21
VAMP4-202ENST00000367740 OR52N2Q8NGI0 321 aa13.76□□□□□ -0.21
VAMP4-202ENST00000367740 FAM222BQ8WU58 562 aa13.76□□□□□ -0.21
VAMP4-202ENST00000367740 TFB1MQ8WVM0 346 aaKnown RBP13.76□□□□□ -0.21
VAMP4-202ENST00000367740 DNAJC1Q96KC8 554 aaKnown RBP13.76□□□□□ -0.21
VAMP4-202ENST00000367740 SARGQ9BW04 601 aa13.76□□□□□ -0.21
VAMP4-202ENST00000367740 DRC3Q9H069 523 aa13.76□□□□□ -0.21
VAMP4-202ENST00000367740 CDCP1Q9H5V8 836 aa13.76□□□□□ -0.21
VAMP4-202ENST00000367740 TRIM45Q9H8W5 580 aaPredicted RBP13.76□□□□□ -0.21
VAMP4-202ENST00000367740 TRPS1Q9UHF7 1281 aa13.76□□□□□ -0.21
VAMP4-202ENST00000367740 SONP18583 2426 aaKnown RBP13.76□□□□□ -0.21
VAMP4-202ENST00000367740 MPDZO75970 2070 aa13.76□□□□□ -0.21
VAMP4-202ENST00000367740 A0A0U1RQJ8 604 aa13.75□□□□□ -0.21
VAMP4-202ENST00000367740 OR2W5A6NFC9 320 aa13.75□□□□□ -0.21
VAMP4-202ENST00000367740 QSOX1O00391 747 aa13.75□□□□□ -0.21
VAMP4-202ENST00000367740 SMAD7O15105 426 aaKnown RBP13.75□□□□□ -0.21
VAMP4-202ENST00000367740 PECAM1P16284 738 aaPredicted RBP13.75□□□□□ -0.21
VAMP4-202ENST00000367740 ACVR2AP27037 513 aa13.75□□□□□ -0.21
VAMP4-202ENST00000367740 ADH7P40394 386 aa13.75□□□□□ -0.21
VAMP4-202ENST00000367740 PEX19P40855 299 aa13.75□□□□□ -0.21
VAMP4-202ENST00000367740 ITGA8P53708 1063 aa13.75□□□□□ -0.21
VAMP4-202ENST00000367740 DAZAP2Q15038 168 aaPredicted RBP13.75□□□□□ -0.21
VAMP4-202ENST00000367740 MINDY4Q4G0A6 757 aa13.75□□□□□ -0.21
VAMP4-202ENST00000367740 MFSD4BQ5TF39 518 aa13.75□□□□□ -0.21
VAMP4-202ENST00000367740 LRRC8BQ6P9F7 803 aa13.75□□□□□ -0.21
VAMP4-202ENST00000367740 PAPD4Q6PIY7 484 aaKnown RBP13.75□□□□□ -0.21
VAMP4-202ENST00000367740 WDR53Q7Z5U6 358 aaPredicted RBP13.75□□□□□ -0.21
VAMP4-202ENST00000367740 CXorf67Q86X51 503 aaPredicted RBP13.75□□□□□ -0.21
VAMP4-202ENST00000367740 RFX6Q8HWS3 928 aa13.75□□□□□ -0.21
VAMP4-202ENST00000367740 SULF2Q8IWU5 870 aa13.75□□□□□ -0.21
VAMP4-202ENST00000367740 VWA5B2Q8N398 1253 aa13.75□□□□□ -0.21
VAMP4-202ENST00000367740 ARMC2Q8NEN0 867 aa13.75□□□□□ -0.21
VAMP4-202ENST00000367740 OR2A1Q8NGT9 310 aa13.75□□□□□ -0.21
VAMP4-202ENST00000367740 MAK16Q9BXY0 300 aaKnown RBP13.75□□□□□ -0.21
VAMP4-202ENST00000367740 IMPACTQ9P2X3 320 aa13.75□□□□□ -0.21
VAMP4-202ENST00000367740 RSPH14Q9UHP6 348 aa13.75□□□□□ -0.21
VAMP4-202ENST00000367740 SLC39A10Q9ULF5 831 aa13.75□□□□□ -0.21
VAMP4-202ENST00000367740 KLF13Q9Y2Y9 288 aaPredicted RBP13.75□□□□□ -0.21
VAMP4-202ENST00000367740 A0A1W2PPV9 198 aa13.74□□□□□ -0.21
VAMP4-202ENST00000367740 KRT87PA6NCN2 255 aa13.74□□□□□ -0.21
VAMP4-202ENST00000367740 NPIPA2E9PIF3 369 aa13.74□□□□□ -0.21
VAMP4-202ENST00000367740 NPIPA3F8WFD2 350 aa13.74□□□□□ -0.21
VAMP4-202ENST00000367740 H7C0S8 307 aa13.74□□□□□ -0.21
VAMP4-202ENST00000367740 CDK2AP1O14519 115 aa13.74□□□□□ -0.21
VAMP4-202ENST00000367740 NDC80O14777 642 aa13.74□□□□□ -0.21
VAMP4-202ENST00000367740 RPN2P04844 631 aa13.74□□□□□ -0.21
VAMP4-202ENST00000367740 UQCRC1P31930 480 aa13.74□□□□□ -0.21
VAMP4-202ENST00000367740 CYB561P49447 251 aa13.74□□□□□ -0.21
VAMP4-202ENST00000367740 TAS2R50P59544 299 aa13.74□□□□□ -0.21
VAMP4-202ENST00000367740 GXYLT1Q4G148 440 aa13.74□□□□□ -0.21
VAMP4-202ENST00000367740 GARNL3Q5VVW2 1013 aa13.74□□□□□ -0.21
VAMP4-202ENST00000367740 FBXW10Q5XX13 1052 aa13.74□□□□□ -0.21
VAMP4-202ENST00000367740 RTL6Q6ICC9 239 aa13.74□□□□□ -0.21
VAMP4-202ENST00000367740 PACS1Q6VY07 963 aa13.74□□□□□ -0.21
VAMP4-202ENST00000367740 B3GNT6Q6ZMB0 384 aa13.74□□□□□ -0.21
VAMP4-202ENST00000367740 PAQR7Q86WK9 346 aa13.74□□□□□ -0.21
VAMP4-202ENST00000367740 ZFP62Q8NB50 900 aaPredicted RBP13.74□□□□□ -0.21
VAMP4-202ENST00000367740 OR5M9Q8NGP3 310 aa13.74□□□□□ -0.21
VAMP4-202ENST00000367740 CFAP61Q8NHU2 1237 aa13.74□□□□□ -0.21
VAMP4-202ENST00000367740 TMEM125Q96AQ2 219 aa13.74□□□□□ -0.21
VAMP4-202ENST00000367740 RAB11FIP5Q9BXF6 653 aa13.74□□□□□ -0.21
VAMP4-202ENST00000367740 SOWAHDA6NJG2 315 aa13.73□□□□□ -0.21
VAMP4-202ENST00000367740 ARHGEF9O43307 516 aa13.73□□□□□ -0.21
VAMP4-202ENST00000367740 PEX1O43933 1283 aa13.73□□□□□ -0.21
VAMP4-202ENST00000367740 CRLF1O75462 422 aa13.73□□□□□ -0.21
VAMP4-202ENST00000367740 TACR1P25103 407 aa13.73□□□□□ -0.21
VAMP4-202ENST00000367740 AGTR2P50052 363 aa13.73□□□□□ -0.21
VAMP4-202ENST00000367740 GEMP55040 296 aa13.73□□□□□ -0.21
VAMP4-202ENST00000367740 ITIH4Q14624 930 aa13.73□□□□□ -0.21
VAMP4-202ENST00000367740 SFT2D3Q587I9 215 aa13.73□□□□□ -0.21
VAMP4-202ENST00000367740 C16orf47Q6ZP98 133 aaPredicted RBP13.73□□□□□ -0.21
VAMP4-202ENST00000367740 RPS19BP1Q86WX3 136 aaKnown RBP13.73□□□□□ -0.21
VAMP4-202ENST00000367740 KIF2BQ8N4N8 673 aa13.73□□□□□ -0.21
VAMP4-202ENST00000367740 SLCO2A1Q92959 643 aa13.73□□□□□ -0.21
VAMP4-202ENST00000367740 Q96MF0 132 aa13.73□□□□□ -0.21
VAMP4-202ENST00000367740 VAT1Q99536 393 aa13.73□□□□□ -0.21
VAMP4-202ENST00000367740 PLCD4Q9BRC7 762 aa13.73□□□□□ -0.21
VAMP4-202ENST00000367740 DPH7Q9BTV6 452 aa13.73□□□□□ -0.21
VAMP4-202ENST00000367740 DEFB127Q9H1M4 99 aa13.73□□□□□ -0.21
VAMP4-202ENST00000367740 GBA3Q9H227 469 aa13.73□□□□□ -0.21
VAMP4-202ENST00000367740 HSD3B7Q9H2F3 369 aa13.73□□□□□ -0.21
VAMP4-202ENST00000367740 BOLA1Q9Y3E2 137 aa13.73□□□□□ -0.21
VAMP4-202ENST00000367740 ARID1AO14497 2285 aa13.73□□□□□ -0.21
VAMP4-202ENST00000367740 FIGNL2A6NMB9 653 aa13.72□□□□□ -0.21
VAMP4-202ENST00000367740 ARHGEF33A8MVX0 844 aa13.72□□□□□ -0.21
VAMP4-202ENST00000367740 KLRC4-KLRK1H3BQV0 150 aa13.72□□□□□ -0.21
VAMP4-202ENST00000367740 P2RX6O15547 441 aa13.72□□□□□ -0.21
VAMP4-202ENST00000367740 VPS26AO75436 327 aa13.72□□□□□ -0.21
VAMP4-202ENST00000367740 OR56A5P0C7T3 313 aa13.72□□□□□ -0.21
VAMP4-202ENST00000367740 CCR7P32248 378 aa13.72□□□□□ -0.21
VAMP4-202ENST00000367740 TRHRP34981 398 aaPredicted RBP13.72□□□□□ -0.21
VAMP4-202ENST00000367740 NR2C2P49116 596 aa13.72□□□□□ -0.21
VAMP4-202ENST00000367740 HLCSP50747 726 aa13.72□□□□□ -0.21
VAMP4-202ENST00000367740 SLC26A5P58743 744 aa13.72□□□□□ -0.21
VAMP4-202ENST00000367740 GPR85P60893 370 aa13.72□□□□□ -0.21
VAMP4-202ENST00000367740 USP10Q14694 798 aaKnown RBP13.72□□□□□ -0.21
VAMP4-202ENST00000367740 MESDQ14696 234 aa13.72□□□□□ -0.21
VAMP4-202ENST00000367740 CCSMST1Q4G0I0 132 aa13.72□□□□□ -0.21
VAMP4-202ENST00000367740 DENND5AQ6IQ26 1287 aa13.72□□□□□ -0.21
VAMP4-202ENST00000367740 ZNF585AQ6P3V2 769 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms