RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 DCAF13Q9NV06 445 aaKnown RBP12.32□□□□□ -0.44
VAMP1-201ENST00000361716 SPASTQ9UBP0 616 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 GPR32O75388 356 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 STAU1O95793 577 aaKnown RBP12.32□□□□□ -0.44
VAMP1-201ENST00000361716 BMP1P13497 986 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 SSTR2P30874 369 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 ZNF157P51786 506 aaPredicted RBP12.32□□□□□ -0.44
VAMP1-201ENST00000361716 SMSP52788 366 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 SRP54P61011 504 aaKnown RBP12.32□□□□□ -0.44
VAMP1-201ENST00000361716 VLDLRP98155 873 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 FGFBP1Q14512 234 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 WSCD2Q2TBF2 565 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 SETMARQ53H47 684 aaPredicted RBP12.32□□□□□ -0.44
VAMP1-201ENST00000361716 FBXL6Q8N531 539 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 RTL3Q8N8U3 475 aaKnown RBP12.32□□□□□ -0.44
VAMP1-201ENST00000361716 FBXO32Q969P5 355 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 SDHCQ99643 169 aaPredicted RBP12.32□□□□□ -0.44
VAMP1-201ENST00000361716 ABCC13Q9NSE7 274 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 CCDC59Q9P031 241 aaKnown RBP12.32□□□□□ -0.44
VAMP1-201ENST00000361716 ZNF225Q9UK10 706 aa12.32□□□□□ -0.44
VAMP1-201ENST00000361716 ABT1Q9ULW3 272 aaKnown RBP12.32□□□□□ -0.44
VAMP1-201ENST00000361716 ARL5CA6NH57 179 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 NT5C1B-RDH14C9J2C7 533 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 GFRA2O00451 464 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 CDRT1O95170 752 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 SNAI1O95863 264 aaPredicted RBP12.31□□□□□ -0.44
VAMP1-201ENST00000361716 C1QCP02747 245 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 MC4RP32245 332 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 S100A3P33764 101 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 THPOP40225 353 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 ETV3P41162 512 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 CAV3P56539 151 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 SNTA1Q13424 505 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 SNAPC1Q16533 368 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 UGT8Q16880 541 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 ARMC12Q5T9G4 340 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 CCDC71Q8IV32 467 aaPredicted RBP12.31□□□□□ -0.44
VAMP1-201ENST00000361716 OR10T2Q8NGX3 314 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 CINPQ9BW66 212 aaPredicted RBP12.31□□□□□ -0.44
VAMP1-201ENST00000361716 POLR1EQ9GZS1 481 aaKnown RBP12.31□□□□□ -0.44
VAMP1-201ENST00000361716 IPPKQ9H8X2 491 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 DERAQ9Y315 318 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 NAALAD2Q9Y3Q0 740 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 C17orf102A2RUQ5 167 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 LEUTXA8MZ59 168 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 SH3BP5O60239 455 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 RPS19P39019 145 aaKnown RBP12.31□□□□□ -0.44
VAMP1-201ENST00000361716 ZXDBP98169 803 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 FADDQ13158 208 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 SEMA3BQ13214 749 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 C5orf22Q49AR2 442 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.31□□□□□ -0.44
VAMP1-201ENST00000361716 TSPYL5Q86VY4 417 aaPredicted RBP12.31□□□□□ -0.44
VAMP1-201ENST00000361716 AADATQ8N5Z0 425 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 SLC37A3Q8NCC5 494 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 OR4F6Q8NGB9 312 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 KCTD13Q8WZ19 329 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 CDKN2AIPNLQ96HQ2 116 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 MAGEB10Q96LZ2 347 aaPredicted RBP12.31□□□□□ -0.44
VAMP1-201ENST00000361716 ATOH8Q96SQ7 321 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 TINF2Q9BSI4 451 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 DPCDQ9BVM2 203 aaPredicted RBP12.31□□□□□ -0.44
VAMP1-201ENST00000361716 C1QTNF6Q9BXI9 259 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 ZYG11BQ9C0D3 744 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 GALNT9Q9HCQ5 603 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 OLA1Q9NTK5 396 aaKnown RBP12.31□□□□□ -0.44
VAMP1-201ENST00000361716 SIRT5Q9NXA8 310 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 SLC25A37Q9NYZ2 338 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 PCDHGB1Q9Y5G3 927 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 C2orf81A6NN90 581 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 SLC7A4O43246 635 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 DNAJB2P25686 324 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 CD52P31358 61 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 DNAJA1P31689 397 aaKnown RBP12.31□□□□□ -0.44
VAMP1-201ENST00000361716 SCNN1AP37088 669 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 ZFP36L2P47974 494 aaKnown RBP12.31□□□□□ -0.44
VAMP1-201ENST00000361716 CSRP3P50461 194 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 PROX2Q3B8N5 592 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 RNASE12Q5GAN4 147 aaKnown RBP12.31□□□□□ -0.44
VAMP1-201ENST00000361716 C10orf62Q5T681 223 aaPredicted RBP12.31□□□□□ -0.44
VAMP1-201ENST00000361716 FAM171A1Q5VUB5 890 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 SHQ1Q6PI26 577 aaKnown RBP12.31□□□□□ -0.44
VAMP1-201ENST00000361716 CHMP1BQ7LBR1 199 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 DENND1CQ8IV53 801 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 NT5C3BQ969T7 300 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 SLC39A13Q96H72 371 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 FAM129BQ96TA1 746 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 NSUN3Q9H649 340 aaKnown RBP12.31□□□□□ -0.44
VAMP1-201ENST00000361716 SLC9A8Q9Y2E8 581 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 ALG5Q9Y673 324 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 KNL1Q8NG31 2342 aa12.31□□□□□ -0.44
VAMP1-201ENST00000361716 LOC102723532A0A0G2JNH3 316 aa12.3□□□□□ -0.44
VAMP1-201ENST00000361716 HLA-DPA1P20036 260 aa12.3□□□□□ -0.44
VAMP1-201ENST00000361716 OR1E2P47887 323 aa12.3□□□□□ -0.44
VAMP1-201ENST00000361716 RPL6Q02878 288 aaKnown RBP12.3□□□□□ -0.44
VAMP1-201ENST00000361716 INTS6LQ5JSJ4 861 aaKnown RBP12.3□□□□□ -0.44
VAMP1-201ENST00000361716 FBXL22Q6P050 247 aa12.3□□□□□ -0.44
VAMP1-201ENST00000361716 MSANTD2Q6P1R3 559 aa12.3□□□□□ -0.44
VAMP1-201ENST00000361716 MBOAT1Q6ZNC8 495 aa12.3□□□□□ -0.44
VAMP1-201ENST00000361716 SLC51BQ86UW2 128 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms