RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 SLC29A4Q7RTT9 530 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 PDSS2Q86YH6 399 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 FAM156AQ8NDB6 213 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 GRHL3Q8TE85 626 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 SLC35A5Q9BS91 424 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 RAI2Q9Y5P3 530 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 LTN1O94822 1766 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 IQSEC2Q5JU85 1478 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 PGM2L1Q6PCE3 622 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 CRTAC1Q9NQ79 661 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 TAS2R8Q9NYW2 309 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 ESR1P03372 595 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 HTR2BP41595 481 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 ST3GAL3Q11203 375 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 TAF1AQ15573 450 aaPredicted RBP9.06□□□□□ -0.96
VPS13A-203ENST00000360280 RAB41Q5JT25 222 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 BARD1Q99728 777 aaKnown RBP9.06□□□□□ -0.96
VPS13A-203ENST00000360280 FOLH1BQ9HBA9 442 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 PROM1O43490 865 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 DSTNP60981 165 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 Q8N402 240 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 FAM110BQ8TC76 370 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 SLC22A18Q96BI1 424 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 C7orf34Q96L11 122 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 TMEM209Q96SK2 561 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 TMEM109Q9BVC6 243 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 STRA6Q9BX79 667 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 USP31Q70CQ4 1352 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 H2AFB2P0C5Z0 115 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 DNAAF1Q8NEP3 725 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 OR8S1Q8NH09 359 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 SLC25A36Q96CQ1 311 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 RDH12Q96NR8 316 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 IL4I1Q96RQ9 567 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 COL1A2P08123 1366 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 MSCO60682 206 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 GNB3P16520 340 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 RALGPS1Q5JS13 557 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 TNFAIP8L2Q6P589 184 aaPredicted RBP9.06□□□□□ -0.96
VPS13A-203ENST00000360280 EGFL6Q8IUX8 553 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 OR52E4Q8NGH9 312 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 DENND1AQ8TEH3 1009 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 ZFAND2BQ8WV99 257 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 RGMAQ96B86 450 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 COL21A1Q96P44 957 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 MTERF1Q99551 399 aaKnown RBP9.06□□□□□ -0.96
VPS13A-203ENST00000360280 ADARB2Q9NS39 739 aaKnown RBP9.06□□□□□ -0.96
VPS13A-203ENST00000360280 ALKBH4Q9NXW9 302 aa9.06□□□□□ -0.96
VPS13A-203ENST00000360280 FAM230AA0A1W2PPH8 454 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 NT5C1B-RDH14C9J2C7 533 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 MEN1O00255 615 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 LILRB5O75023 590 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 CDH11P55287 796 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 CRHR2Q13324 411 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 MEDAGQ5VYS4 303 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 CPT1CQ8TCG5 803 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 SCRN2Q96FV2 425 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 TREHO43280 583 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 BMP6P22004 513 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 DPP6P42658 865 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 RPL13AP3Q6NVV1 102 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 BEST3Q8N1M1 668 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 SRMSQ9H3Y6 488 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 PRKYO43930 277 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 RFWD3Q6PCD5 774 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 AQP11Q8NBQ7 271 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 CMKLR1Q99788 373 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 FZD4Q9ULV1 537 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 APODP05090 189 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 ADORA2AP29274 412 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 NPLQ9BXD5 320 aaPredicted RBP9.05□□□□□ -0.96
VPS13A-203ENST00000360280 NMUR1Q9HB89 426 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 SMAD9O15198 467 aaKnown RBP9.05□□□□□ -0.96
VPS13A-203ENST00000360280 PDE12Q6L8Q7 609 aaKnown RBP9.05□□□□□ -0.96
VPS13A-203ENST00000360280 FAM84AQ96KN4 292 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 C1orf21Q9H246 121 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 A0A0G2JLW4 131 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 J3QLW9 94 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 SULT1B1O43704 296 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 ZNF19P17023 458 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 CAMLGP49069 296 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 LRRC37A5PQ49AS3 106 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 NOMO2Q5JPE7 1267 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 MBOAT1Q6ZNC8 495 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 ZNF767PQ75MW2 155 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 IQCKQ8N0W5 287 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 C12orf29Q8N999 325 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 CCDC32Q9BV29 185 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 ARMC1Q9NVT9 282 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 A8MXE2 369 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 CDK14O94921 469 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 CHRM5P08912 532 aaPredicted RBP9.05□□□□□ -0.96
VPS13A-203ENST00000360280 ZNF283Q8N7M2 679 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 PMEPA1Q969W9 287 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 SLC41A3Q96GZ6 507 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 PREX1Q8TCU6 1659 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 A0A1B0GVI7 797 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 FAM155BO75949 473 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 C3P1Q6ZMU1 363 aa9.05□□□□□ -0.96
VPS13A-203ENST00000360280 NEIL3Q8TAT5 605 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms