RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 IGFLR1Q9H665 355 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 TRPS1Q9UHF7 1281 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 PRKAB1Q9Y478 270 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 E2F3O00716 465 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 TEX28O15482 410 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 TPST2O60704 377 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 PRLP01236 227 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 TCEA1P23193 301 aaKnown RBP11.89□□□□□ -0.51
COL20A1-201ENST00000358894 DNAJA1P31689 397 aaKnown RBP11.89□□□□□ -0.51
COL20A1-201ENST00000358894 DGKGP49619 791 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 SPATS1Q496A3 300 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 PPP2R2DQ66LE6 453 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 DOCK3Q8IZD9 2030 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 ITPKCQ96DU7 683 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 QRFPRQ96P65 431 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 CASD1Q96PB1 797 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 C12orf4Q9NQ89 552 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 THUMPD1Q9NXG2 353 aaKnown RBP11.89□□□□□ -0.51
COL20A1-201ENST00000358894 TOR4AQ9NXH8 423 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 ENTPD4Q9Y227 616 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 ERGIC3Q9Y282 383 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 A0A1B0GTL3 188 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 M0QX08 132 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 TSPAN4O14817 238 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 CACNG3O60359 315 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 CD36P16671 472 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 MYL12AP19105 171 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 GGT1P19440 569 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 MAPK12P53778 367 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 SRP54P61011 504 aaKnown RBP11.89□□□□□ -0.51
COL20A1-201ENST00000358894 ELP6Q0PNE2 266 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 PCBP2Q15366 365 aaKnown RBP eCLIP11.89□□□□□ -0.51
COL20A1-201ENST00000358894 TIMM50Q3ZCQ8 353 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 GPAT3Q53EU6 434 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 IFI44LQ53G44 452 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 Q6ZSR9 355 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 LIMS2Q7Z4I7 341 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 VTCN1Q7Z7D3 282 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 CLIP4Q8N3C7 705 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 METTL25Q8N6Q8 603 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 DNAJB8Q8NHS0 232 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 FRS2Q8WU20 508 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 CMTM7Q96FZ5 175 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 PAWRQ96IZ0 340 aaKnown RBP11.89□□□□□ -0.51
COL20A1-201ENST00000358894 KLHL28Q9NXS3 571 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 SEC14L3Q9UDX4 400 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 PCDHB14Q9Y5E9 798 aa11.89□□□□□ -0.51
COL20A1-201ENST00000358894 IGLV3-10A0A075B6K4 115 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 LOC110117498-PIK3R3F6TDL0 507 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 TSPAN6O43657 245 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 TLL1O43897 1013 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 MITFO75030 526 aaPredicted RBP11.88□□□□□ -0.51
COL20A1-201ENST00000358894 IFNW1P05000 195 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 CXCR2P25025 360 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 OR1E2P47887 323 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 HLCSP50747 726 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 RPS13P62277 151 aaKnown RBP11.88□□□□□ -0.51
COL20A1-201ENST00000358894 TRIQKQ629K1 86 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 SDE2Q6IQ49 451 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 GALNT7Q86SF2 657 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 GPR26Q8NDV2 337 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 KBTBD8Q8NFY9 601 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 WDR36Q8NI36 951 aaKnown RBP11.88□□□□□ -0.51
COL20A1-201ENST00000358894 PIH1D2Q8WWB5 315 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 MYLIPQ8WY64 445 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 RHBDF1Q96CC6 855 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 INPP5KQ9BT40 448 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 RHBGQ9H310 441 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 MTG2Q9H4K7 406 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 KAT8Q9H7Z6 458 aaKnown RBP11.88□□□□□ -0.51
COL20A1-201ENST00000358894 EQTNQ9NQ60 294 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 CREBZFQ9NS37 354 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 MICAL3Q7RTP6 2002 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 H0YAE9 185 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 WNT9AO14904 365 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 EPHX1P07099 455 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 CBSLP0DN79 551 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 HOXB6P17509 224 aaKnown RBP11.88□□□□□ -0.51
COL20A1-201ENST00000358894 NTSP30990 170 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 CBSP35520 551 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 PLA2G16P53816 162 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 ZXDBP98169 803 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 SF1Q15637 639 aaKnown RBP11.88□□□□□ -0.51
COL20A1-201ENST00000358894 COLEC12Q5KU26 742 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 CRTC1Q6UUV9 634 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 UBE2Q1Q7Z7E8 422 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 OR10G2Q8NGC3 310 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 EGLN2Q96KS0 407 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 ZNF641Q96N77 438 aaPredicted RBP11.88□□□□□ -0.51
COL20A1-201ENST00000358894 SLC35A5Q9BS91 424 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 KCNH6Q9H252 994 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 C1QTNF3-AMACRE9PGA6 284 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 TMCC2O75069 709 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 LEFTY1O75610 366 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 KLK1P06870 262 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 BLVRAP53004 296 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 ABATP80404 500 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 ATAD3BQ5T9A4 648 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 HMBOX1Q6NT76 420 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 CLECL1Q8IZS7 167 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms