RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 FAM109AQ8N4B1 249 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 PRMT6Q96LA8 375 aaPredicted RBP8.54□□□□□ -1.04
COL6A6-201ENST00000358511 UROC1Q96N76 676 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 TM6SF2Q9BZW4 377 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 ALKBH4Q9NXW9 302 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 FZD10Q9ULW2 581 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 PCDHB3Q9Y5E6 796 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 CLCA3PQ9Y6N3 262 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 PCDHGA12O60330 932 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 ENGP17813 658 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 CLK3P49761 638 aaKnown RBP8.54□□□□□ -1.04
COL6A6-201ENST00000358511 CTBP2P56545 445 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 PER3P56645 1201 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 TAF1AQ15573 450 aaPredicted RBP8.54□□□□□ -1.04
COL6A6-201ENST00000358511 PRPF38BQ5VTL8 546 aaKnown RBP8.54□□□□□ -1.04
COL6A6-201ENST00000358511 RAB11FIP2Q7L804 512 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 NRG4Q8WWG1 115 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 ZBTB20Q9HC78 741 aaPredicted RBP8.54□□□□□ -1.04
COL6A6-201ENST00000358511 FAM105AQ9NUU6 356 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 MGAT4CQ9UBM8 478 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 KCNN3Q9UGI6 736 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 PCDHGA11Q9Y5H2 935 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 EEF1E1O43324 174 aaKnown RBP8.54□□□□□ -1.04
COL6A6-201ENST00000358511 SLC25A11Q02978 314 aaKnown RBP8.54□□□□□ -1.04
COL6A6-201ENST00000358511 PRKCDQ05655 676 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 CBX2Q14781 532 aaPredicted RBP8.54□□□□□ -1.04
COL6A6-201ENST00000358511 DUOXA1Q1HG43 343 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 DESI1Q6ICB0 168 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 SLC36A4Q6YBV0 504 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 ZNF598Q86UK7 904 aaKnown RBP8.54□□□□□ -1.04
COL6A6-201ENST00000358511 SIDT2Q8NBJ9 832 aaKnown RBP8.54□□□□□ -1.04
COL6A6-201ENST00000358511 EXOSC8Q96B26 276 aaKnown RBP8.54□□□□□ -1.04
COL6A6-201ENST00000358511 COQ10AQ96MF6 247 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 TMEM74Q96NL1 305 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 NPLQ9BXD5 320 aaPredicted RBP8.54□□□□□ -1.04
COL6A6-201ENST00000358511 MRTO4Q9UKD2 239 aaKnown RBP8.54□□□□□ -1.04
COL6A6-201ENST00000358511 KIAA0100Q14667 2235 aaKnown RBP8.54□□□□□ -1.04
COL6A6-201ENST00000358511 KMOO15229 486 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 KAT7O95251 611 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 L1CAMP32004 1257 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 CRISP3P54108 245 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 SLC10A7Q0GE19 358 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 UAP1L1Q3KQV9 507 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 NXPE1Q8N323 547 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 GALNT11Q8NCW6 608 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 OR10T2Q8NGX3 314 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 ZNF563Q8TA94 476 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 SH3D21A4FU49 640 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 RFC2P35250 354 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 ABHD18Q0P651 414 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 TCEAL1Q15170 157 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 CMASQ8NFW8 434 aaPredicted RBP8.54□□□□□ -1.04
COL6A6-201ENST00000358511 IKZF4Q9H2S9 585 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 MAGIXQ9H6Y5 334 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 NRCAMQ92823 1304 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 ELFN1P0C7U0 828 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 PBX3P40426 434 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 RPL35P42766 123 aaKnown RBP8.54□□□□□ -1.04
COL6A6-201ENST00000358511 OR3A3P47888 321 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 OR3A2P47893 321 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 CDH11P55287 796 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 FGL2Q14314 439 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 PON3Q15166 354 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 HACD2Q6Y1H2 254 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 PLPPR4Q7Z2D5 763 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 MCCC1Q96RQ3 725 aaPredicted RBP8.54□□□□□ -1.04
COL6A6-201ENST00000358511 PHB2Q99623 299 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 HACL1Q9UJ83 578 aa8.54□□□□□ -1.04
COL6A6-201ENST00000358511 ECI2O75521 394 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 SLC35G4P0C7Q5 338 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 MAGEA6P43360 314 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 UFM1P61960 85 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 CHIT1Q13231 466 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 SLC51AQ86UW1 340 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 TM9SF2Q99805 663 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 GON7Q9BXV9 100 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 SEPT4O43236 478 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 PRKYO43930 277 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 IFNA21P01568 189 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 ITGB5P18084 799 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 GADD45AP24522 165 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 MEDAGQ5VYS4 303 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 NANOGP8Q6NSW7 305 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 SLC2A7Q6PXP3 512 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 MON1AQ86VX9 555 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 CIDECQ96AQ7 238 aaPredicted RBP8.53□□□□□ -1.04
COL6A6-201ENST00000358511 NANOGQ9H9S0 305 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 CDH7Q9ULB5 785 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 TMEM5Q9Y2B1 443 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 HCN4Q9Y3Q4 1203 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 PCDHA2Q9Y5H9 948 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 RAI2Q9Y5P3 530 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 ATAD5Q96QE3 1844 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 IRS2Q9Y4H2 1338 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 ATRNL1Q5VV63 1379 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 SSX5O60225 188 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 MT-ND5P03915 603 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 ALDH2P05091 517 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 CD6P30203 668 aa8.53□□□□□ -1.04
COL6A6-201ENST00000358511 ETV1P50549 477 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms