RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 TRIM42Q8IWZ5 723 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 CHCHD4Q8N4Q1 142 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 OR4K1Q8NGD4 311 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 WDR34Q96EX3 536 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 NTMT1Q9BV86 223 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 CHRNA10Q9GZZ6 450 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 SPNS1Q9H2V7 528 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 SEC16AO15027 2179 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 CCDC187A0A096LP49 1063 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 TRBC2A0A5B9 178 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 EFCAB7A8K855 629 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 PPP6CO00743 305 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 OR1F1O43749 312 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 PRAMEF4O60810 478 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 GRK2P25098 689 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 HNF4AP41235 474 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 SH3BP2P78314 561 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 FOXM1Q08050 763 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 TARDBPQ13148 414 aaKnown RBP eCLIP14.61□□□□□ -0.07
TPM1-206ENST00000358278 EIF3IQ13347 325 aaKnown RBP14.61□□□□□ -0.07
TPM1-206ENST00000358278 TUBB3Q13509 450 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 HIST2H2ACQ16777 129 aaPredicted RBP14.61□□□□□ -0.07
TPM1-206ENST00000358278 PRAMEF9Q5VWM5 478 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 LIPJQ5W064 366 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 HIST2H2AA3Q6FI13 130 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 GRHL2Q6ISB3 625 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 TMIGD1Q6UXZ0 262 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 GPRIN3Q6ZVF9 776 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 RAB11FIP2Q7L804 512 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 CACTIN-AS1Q8N1I8 211 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 ZNF740Q8NDX6 193 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 OR4F6Q8NGB9 312 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 FAM76AQ8TAV0 307 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 RERGQ96A58 199 aaPredicted RBP14.61□□□□□ -0.07
TPM1-206ENST00000358278 FCRL4Q96PJ5 515 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 SHCBP1LQ9BZQ2 653 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 EML4Q9HC35 981 aaKnown RBP14.61□□□□□ -0.07
TPM1-206ENST00000358278 MID1IP1Q9NPA3 183 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 IRAK4Q9NWZ3 460 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 RNF11Q9Y3C5 154 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 LOXL2Q9Y4K0 774 aa14.61□□□□□ -0.07
TPM1-206ENST00000358278 TMEM150CB9EJG8 249 aa14.6□□□□□ -0.07
TPM1-206ENST00000358278 CRCPO75575 148 aa14.6□□□□□ -0.07
TPM1-206ENST00000358278 FOLR1P15328 257 aa14.6□□□□□ -0.07
TPM1-206ENST00000358278 CD22P20273 847 aa14.6□□□□□ -0.07
TPM1-206ENST00000358278 SERPINB5P36952 375 aa14.6□□□□□ -0.07
TPM1-206ENST00000358278 CASP2P42575 452 aa14.6□□□□□ -0.07
TPM1-206ENST00000358278 PKNOX1P55347 436 aa14.6□□□□□ -0.07
TPM1-206ENST00000358278 ACY1Q03154 408 aa14.6□□□□□ -0.07
TPM1-206ENST00000358278 RELAQ04206 551 aa14.6□□□□□ -0.07
TPM1-206ENST00000358278 PCDH1Q08174 1060 aa14.6□□□□□ -0.07
TPM1-206ENST00000358278 RBBP5Q15291 538 aaKnown RBP14.6□□□□□ -0.07
TPM1-206ENST00000358278 GPR19Q15760 415 aa14.6□□□□□ -0.07
TPM1-206ENST00000358278 CPSF6Q16630 551 aaKnown RBP eCLIP14.6□□□□□ -0.07
TPM1-206ENST00000358278 C3orf38Q5JPI3 329 aa14.6□□□□□ -0.07
TPM1-206ENST00000358278 LETMD1Q6P1Q0 360 aa14.6□□□□□ -0.07
TPM1-206ENST00000358278 CYB5D1Q6P9G0 228 aa14.6□□□□□ -0.07
TPM1-206ENST00000358278 FOXR1Q6PIV2 292 aa14.6□□□□□ -0.07
TPM1-206ENST00000358278 TMPRSS7Q7RTY8 843 aa14.6□□□□□ -0.07
TPM1-206ENST00000358278 AGAP11Q8TF27 550 aa14.6□□□□□ -0.07
TPM1-206ENST00000358278 MAGEB10Q96LZ2 347 aaPredicted RBP14.6□□□□□ -0.07
TPM1-206ENST00000358278 OR6C1Q96RD1 312 aa14.6□□□□□ -0.07
TPM1-206ENST00000358278 PITHD1Q9GZP4 211 aaPredicted RBP14.6□□□□□ -0.07
TPM1-206ENST00000358278 FGF21Q9NSA1 209 aa14.6□□□□□ -0.07
TPM1-206ENST00000358278 OCIAD1Q9NX40 245 aa14.6□□□□□ -0.07
TPM1-206ENST00000358278 PILRAQ9UKJ1 303 aa14.6□□□□□ -0.07
TPM1-206ENST00000358278 PLCL2Q9UPR0 1127 aa14.6□□□□□ -0.07
TPM1-206ENST00000358278 A0A1B0GTL3 188 aa14.59□□□□□ -0.07
TPM1-206ENST00000358278 TMEM114B3SHH9 223 aa14.59□□□□□ -0.07
TPM1-206ENST00000358278 OR4F21O95013 312 aa14.59□□□□□ -0.07
TPM1-206ENST00000358278 ESRRBO95718 433 aa14.59□□□□□ -0.07
TPM1-206ENST00000358278 HSPA4LO95757 839 aa14.59□□□□□ -0.07
TPM1-206ENST00000358278 CHRNGP07510 517 aa14.59□□□□□ -0.07
TPM1-206ENST00000358278 JMJD7P0C870 316 aa14.59□□□□□ -0.07
TPM1-206ENST00000358278 BCL6P41182 706 aa14.59□□□□□ -0.07
TPM1-206ENST00000358278 ERVPABLB-1P60509 514 aa14.59□□□□□ -0.07
TPM1-206ENST00000358278 FOXC1Q12948 553 aa14.59□□□□□ -0.07
TPM1-206ENST00000358278 STX3Q13277 289 aa14.59□□□□□ -0.07
TPM1-206ENST00000358278 E2F2Q14209 437 aa14.59□□□□□ -0.07
TPM1-206ENST00000358278 GGTA1PQ4G0N0 100 aa14.59□□□□□ -0.07
TPM1-206ENST00000358278 ARL13AQ5H913 290 aaPredicted RBP14.59□□□□□ -0.07
TPM1-206ENST00000358278 ATG16L1Q676U5 607 aa14.59□□□□□ -0.07
TPM1-206ENST00000358278 MED27Q6P2C8 311 aa14.59□□□□□ -0.07
TPM1-206ENST00000358278 FBXO42Q6P3S6 717 aa14.59□□□□□ -0.07
TPM1-206ENST00000358278 SYVN1Q86TM6 617 aa14.59□□□□□ -0.07
TPM1-206ENST00000358278 MCATQ8IVS2 390 aaKnown RBP14.59□□□□□ -0.07
TPM1-206ENST00000358278 DNAJC22Q8N4W6 341 aa14.59□□□□□ -0.07
TPM1-206ENST00000358278 CDYL2Q8N8U2 506 aa14.59□□□□□ -0.07
TPM1-206ENST00000358278 L3MBTL4Q8NA19 623 aa14.59□□□□□ -0.07
TPM1-206ENST00000358278 RAB3IL1Q8TBN0 382 aa14.59□□□□□ -0.07
TPM1-206ENST00000358278 UBE2E3Q969T4 207 aa14.59□□□□□ -0.07
TPM1-206ENST00000358278 MANSC1Q9H8J5 431 aa14.59□□□□□ -0.07
TPM1-206ENST00000358278 SIDT1Q9NXL6 827 aaKnown RBP14.59□□□□□ -0.07
TPM1-206ENST00000358278 PCDHGA4Q9Y5G9 962 aa14.59□□□□□ -0.07
TPM1-206ENST00000358278 FER1L5A0AVI2 2057 aa14.59□□□□□ -0.07
TPM1-206ENST00000358278 UBFD1O14562 309 aaKnown RBP14.58□□□□□ -0.07
TPM1-206ENST00000358278 FFAR3O14843 346 aa14.58□□□□□ -0.07
TPM1-206ENST00000358278 PLD2O14939 933 aa14.58□□□□□ -0.07
TPM1-206ENST00000358278 GPR42O15529 346 aa14.58□□□□□ -0.07
TPM1-206ENST00000358278 HCRTR1O43613 425 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms