RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 SCAMP2O15127 329 aaKnown RBP15.29■□□□□ 0.04
PHTF1-201ENST00000357783 DIRAS1O95057 198 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 C1orf105O95561 183 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 RPS13P62277 151 aaKnown RBP15.29■□□□□ 0.04
PHTF1-201ENST00000357783 TBPL1P62380 186 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 EPS8Q12929 822 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 CAMK1Q14012 370 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 RAET1GQ6H3X3 334 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 RBM23Q86U06 439 aaKnown RBP15.29■□□□□ 0.04
PHTF1-201ENST00000357783 CHPFQ8IZ52 775 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 SP7Q8TDD2 431 aaPredicted RBP15.29■□□□□ 0.04
PHTF1-201ENST00000357783 ZNF480Q8WV37 535 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 NAA50Q9GZZ1 169 aaKnown RBP15.29■□□□□ 0.04
PHTF1-201ENST00000357783 BRF2Q9HAW0 419 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 FANCEQ9HB96 536 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 EXD2Q9NVH0 621 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 SH2B3Q9UQQ2 575 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 KCNE2Q9Y6J6 123 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 hCG_2039718K7EN88 272 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 ADH1CP00326 375 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 SLC6A11P48066 632 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 HNRNPFP52597 415 aaKnown RBP15.29■□□□□ 0.04
PHTF1-201ENST00000357783 STARD3Q14849 445 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 CTU2Q2VPK5 515 aaKnown RBP15.29■□□□□ 0.04
PHTF1-201ENST00000357783 CATSPEREQ5SY80 951 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 VTCN1Q7Z7D3 282 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 PTOV1Q86YD1 416 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 HIPK1Q86Z02 1210 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 CELF5Q8N6W0 485 aaKnown RBP15.29■□□□□ 0.04
PHTF1-201ENST00000357783 ARL10Q8N8L6 244 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 HCAR2Q8TDS4 363 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 WFIKKN2Q8TEU8 576 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 ARRDC3Q96B67 414 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 ZNF707Q96C28 371 aaPredicted RBP15.29■□□□□ 0.04
PHTF1-201ENST00000357783 C11orf24Q96F05 449 aaPredicted RBP15.29■□□□□ 0.04
PHTF1-201ENST00000357783 BARD1Q99728 777 aaKnown RBP15.29■□□□□ 0.04
PHTF1-201ENST00000357783 C3orf18Q9UK00 162 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 KIAA1549LQ6ZVL6 1849 aa15.29■□□□□ 0.04
PHTF1-201ENST00000357783 CHD9Q3L8U1 2897 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 GNG14A0A1W2PPG7 69 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 SOBPA7XYQ1 873 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 GABRR3A8MPY1 467 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 MYO1GB0I1T2 1018 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 MITFO75030 526 aaPredicted RBP15.28■□□□□ 0.04
PHTF1-201ENST00000357783 PRNPP04156 253 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 HSD3B1P14060 373 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 GPX2P18283 190 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 CRHBPP24387 322 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 HSD3B2P26439 372 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 MAGEA2P43356 314 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 PPIGQ13427 754 aaKnown RBP eCLIP15.28■□□□□ 0.042e-6■■□□□ 11.7
PHTF1-201ENST00000357783 CPTPQ5TA50 214 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 BROXQ5VW32 411 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 SLCO4C1Q6ZQN7 724 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 RTL10Q7L3V2 364 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 GALNT5Q7Z7M9 940 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 KLHDC8AQ8IYD2 350 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 CHDHQ8NE62 594 aaPredicted RBP15.28■□□□□ 0.04
PHTF1-201ENST00000357783 NUS1Q96E22 293 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 TPT1P8Q9HAU6 139 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 TMEFF2Q9UIK5 374 aaPredicted RBP15.28■□□□□ 0.04
PHTF1-201ENST00000357783 LOC100130705A0A1B0GUX0 176 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 H3BMQ9 156 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 PSMD11O00231 422 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 ZNF197O14709 1029 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 MMP20O60882 483 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 ATE1O95260 518 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 MAPK10P53779 464 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 CD47Q08722 323 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 CPZQ66K79 652 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 MED27Q6P2C8 311 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 CRTC3Q6UUV7 619 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 NLRP8Q86W28 1048 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 DCP2Q8IU60 420 aaKnown RBP15.28■□□□□ 0.04
PHTF1-201ENST00000357783 SFTPA1Q8IWL2 248 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 C12orf76Q8N812 135 aaPredicted RBP15.28■□□□□ 0.04
PHTF1-201ENST00000357783 SNX19Q92543 992 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 COG8Q96MW5 612 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 ORC6Q9Y5N6 252 aa15.28■□□□□ 0.04
PHTF1-201ENST00000357783 MGAT4DA6NG13 374 aa15.27■□□□□ 0.04
PHTF1-201ENST00000357783 NUDT7P0C024 238 aa15.27■□□□□ 0.04
PHTF1-201ENST00000357783 KDELR2P33947 212 aa15.27■□□□□ 0.04
PHTF1-201ENST00000357783 TTKP33981 857 aa15.27■□□□□ 0.04
PHTF1-201ENST00000357783 GPR1P46091 355 aa15.27■□□□□ 0.04
PHTF1-201ENST00000357783 IL1RL1Q01638 556 aa15.27■□□□□ 0.04
PHTF1-201ENST00000357783 ZNF658BQ4V348 819 aaPredicted RBP15.27■□□□□ 0.04
PHTF1-201ENST00000357783 RBM48Q5RL73 367 aaKnown RBP15.27■□□□□ 0.04
PHTF1-201ENST00000357783 CAPN13Q6MZZ7 669 aaPredicted RBP15.27■□□□□ 0.04
PHTF1-201ENST00000357783 CEP68Q76N32 757 aa15.27■□□□□ 0.04
PHTF1-201ENST00000357783 TRMT11Q7Z4G4 463 aaKnown RBP15.27■□□□□ 0.04
PHTF1-201ENST00000357783 CHTF18Q8WVB6 975 aa15.27■□□□□ 0.04
PHTF1-201ENST00000357783 HDAC2Q92769 488 aaKnown RBP15.27■□□□□ 0.04
PHTF1-201ENST00000357783 SH3BP4Q9P0V3 963 aa15.27■□□□□ 0.04
PHTF1-201ENST00000357783 PCDHB11Q9Y5F2 797 aa15.27■□□□□ 0.04
PHTF1-201ENST00000357783 ZNF701M0R085 212 aaPredicted RBP15.27■□□□□ 0.03
PHTF1-201ENST00000357783 SAP18O00422 153 aaKnown RBP15.27■□□□□ 0.03
PHTF1-201ENST00000357783 HOXC11O43248 304 aaPredicted RBP15.27■□□□□ 0.03
PHTF1-201ENST00000357783 PCDH7O60245 1069 aa15.27■□□□□ 0.03
PHTF1-201ENST00000357783 LILRB5O75023 590 aa15.27■□□□□ 0.03
PHTF1-201ENST00000357783 CPNE6O95741 557 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms