RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 AP5B1Q2VPB7 878 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 USP39Q53GS9 565 aaKnown RBP6.39□□□□□ -1.39
TRIM38-201ENST00000357085 CATSPERGQ6ZRH7 1159 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 YIPF7Q8N8F6 280 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 UBTD2Q8WUN7 234 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 CDCA4Q9BXL8 241 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 XYLT2Q9H1B5 865 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 MIOSQ9NXC5 875 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 ZFR2Q9UPR6 939 aaKnown RBP6.39□□□□□ -1.39
TRIM38-201ENST00000357085 MGAT4BQ9UQ53 548 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 GINS2Q9Y248 185 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 PLEKHA6Q9Y2H5 1048 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 IFNGP01579 166 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 CXCL8P10145 99 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 CHRM3P20309 590 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 LPOP22079 712 aaPredicted RBP6.39□□□□□ -1.39
TRIM38-201ENST00000357085 CHMP1BQ7LBR1 199 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 SLC34A3Q8N130 599 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 IL12RB2Q99665 862 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 MED18Q9BUE0 208 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 MEMO1Q9Y316 297 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 ZNF879B4DU55 563 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 NME4O00746 187 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 KPNA6O60684 536 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 GRK4P32298 578 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 SLC11A2P49281 568 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 CLCN4P51793 760 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 RACK1P63244 317 aaKnown RBP6.39□□□□□ -1.39
TRIM38-201ENST00000357085 ADPRMQ3LIE5 342 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 SPATA2LQ8IUW3 424 aaPredicted RBP6.39□□□□□ -1.39
TRIM38-201ENST00000357085 B3GALNT2Q8NCR0 500 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 OR2T11Q8NH01 316 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 C1QTNF3Q9BXJ4 246 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 DUS2Q9NX74 493 aaKnown RBP6.39□□□□□ -1.39
TRIM38-201ENST00000357085 PRAMEF2O60811 474 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 PAHP00439 452 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 CSF3P09919 207 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 BACE1P56817 501 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 RAP2BP61225 183 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 SNRPD2P62316 118 aaKnown RBP6.39□□□□□ -1.39
TRIM38-201ENST00000357085 GTF2H2Q13888 395 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 DUOXA1Q1HG43 343 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 GTF2H2CQ6P1K8 395 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 HAGHLQ6PII5 290 aaPredicted RBP6.39□□□□□ -1.39
TRIM38-201ENST00000357085 FAM196AQ6ZSG2 479 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 PDZD9Q8IXQ8 264 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 SLC43A2Q8N370 569 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 SPPL2AQ8TCT8 520 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 SGCDQ92629 289 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 GPR63Q9BZJ6 419 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 TIGARQ9NQ88 270 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 FKBP7Q9Y680 259 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 FPGTO14772 594 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 ZNF432O94892 652 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 GALP22466 123 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 GGT2P36268 569 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 RAG2P55895 527 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 ST3GAL4Q11206 333 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 PPP1R3AQ16821 1122 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 DUSP6Q16828 381 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 EIPR1Q53HC9 387 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 NKAPLQ5M9Q1 402 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 NCBP2-AS2Q69YL0 99 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 LINGO4Q6UY18 593 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 RNF165Q6ZSG1 346 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 NRARPQ7Z6K4 114 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 NARFLQ9H6Q4 476 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 NUFIP1Q9UHK0 495 aaKnown RBP6.39□□□□□ -1.39
TRIM38-201ENST00000357085 NOD1Q9Y239 953 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 SMCHD1A6NHR9 2005 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 UNCXA6NJT0 531 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 KIAA0513O60268 411 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 ARL6IP5O75915 188 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 RAB36O95755 333 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 TRBC1P01850 177 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 HOXB1P14653 301 aaPredicted RBP6.39□□□□□ -1.39
TRIM38-201ENST00000357085 DEFA5Q01523 94 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 SREBF2Q12772 1141 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 RAP1GAP2Q684P5 730 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 LPCAT3Q6P1A2 487 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 SYT12Q8IV01 421 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 NAT16Q8N8M0 369 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 SETD7Q8WTS6 366 aaKnown RBP6.39□□□□□ -1.39
TRIM38-201ENST00000357085 ZBED3Q96IU2 234 aaPredicted RBP6.39□□□□□ -1.39
TRIM38-201ENST00000357085 APOL5Q9BWW9 433 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 NT5MQ9NPB1 228 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 ACTR10Q9NZ32 417 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.39□□□□□ -1.39
TRIM38-201ENST00000357085 PPEF2O14830 753 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 CREG1O75629 220 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 RGS11O94810 467 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 CLTBP09497 229 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 CD1EP15812 388 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 RHOQP17081 205 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 EVI2BP34910 448 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 PGDP52209 483 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 CDNFQ49AH0 187 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 NOL9Q5SY16 702 aaKnown RBP6.39□□□□□ -1.39
TRIM38-201ENST00000357085 MLIPQ5VWP3 458 aa6.39□□□□□ -1.39
TRIM38-201ENST00000357085 PLAG1Q6DJT9 500 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms