RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 TFB2MQ9H5Q4 396 aaKnown RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 CENPMQ9NSP4 180 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 MAFFQ9ULX9 164 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 C2orf74A8MZ97 194 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 PLD2O14939 933 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 AP1G1O43747 822 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 RPLP0P05388 317 aaKnown RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 ATP1B2P14415 290 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 ACSL1P33121 698 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 CRISP1P54107 249 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 ECH1Q13011 328 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 PGAM4Q8N0Y7 254 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 OR5M3Q8NGP4 307 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 TM9SF4Q92544 642 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 NECTIN4Q96NY8 510 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 MTERF1Q99551 399 aaKnown RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 TRPV4Q9HBA0 871 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 NKX1-2Q9UD57 310 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 PRODH2Q9UF12 536 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 KCNS2Q9ULS6 477 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 TMEM5Q9Y2B1 443 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 PLIN4Q96Q06 1357 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 A0A1W2PRQ8 180 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 TBX10O75333 385 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 HNF1BP35680 557 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 DAOAP59103 153 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 CRTC2Q53ET0 693 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 SYCE2Q6PIF2 218 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 CMTR2Q8IYT2 770 aaKnown RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 IL22RA1Q8N6P7 574 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 UTP4Q969X6 686 aaKnown RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 OTUB2Q96DC9 234 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 CENPNQ96H22 339 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 SLC2A11Q9BYW1 496 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 ERVK-18Q9QC07 812 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 ZFR2Q9UPR6 939 aaKnown RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 PLEKHA6Q9Y2H5 1048 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 PIP5K1BO14986 540 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 SPATA31C1P0DKV0 1188 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 TMBIM6P55061 237 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 MALLQ13021 153 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 LRP8Q14114 963 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 GANABQ14697 944 aaKnown RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 GPR68Q15743 365 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 C1orf94Q6P1W5 598 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 C22orf39Q6P5X5 142 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 ANKRD46Q86W74 232 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 PLD5Q8N7P1 536 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 FAM47BQ8NA70 645 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 GEMIN6Q8WXD5 167 aaKnown RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 ADAD1Q96M93 576 aaKnown RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 ERMAPQ96PL5 475 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 SLC6A15Q9H2J7 730 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 BRF2Q9HAW0 419 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 TAS2R1Q9NYW7 299 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 STOX2Q9P2F5 926 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 BAIAP2Q9UQB8 552 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 TIMM22Q9Y584 194 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 WASF2Q9Y6W5 498 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 DISC1C4P0D8 188 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 RNF13O43567 381 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 KDM4BO94953 1096 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 ANGPTL1O95841 491 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 CFL1P23528 166 aaKnown RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 SEPHS1P49903 392 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 TEAD2Q15562 447 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 MYLK3Q32MK0 819 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 FAM174BQ3ZCQ3 159 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 DCUN1D3Q8IWE4 304 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 JAGN1Q8N5M9 183 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 ELP5Q8TE02 316 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 BORCS5Q969J3 196 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 PHF12Q96QT6 1004 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 G6PC3Q9BUM1 346 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 METTL8Q9H825 291 aaKnown RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 LRRC4CQ9HCJ2 640 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 TVP23BQ9NYZ1 205 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 PPP4R1LQ9P1A2 415 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 CDH22Q9UJ99 828 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 ARL5AQ9Y689 179 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 MICAL3Q7RTP6 2002 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 COL1A1P02452 1464 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 SH3PXD2BA1X283 911 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 SAP18O00422 153 aaKnown RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 AIREO43918 545 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 PFKLP17858 780 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 CCNOP22674 350 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 HYAL2Q12891 473 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 RBM44Q6ZP01 1051 aaKnown RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 TIGD4Q8IY51 512 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 C1orf127Q8N9H9 656 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 CYB5D2Q8WUJ1 264 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 TMEM234Q8WY98 164 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 NDRG1Q92597 394 aaKnown RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 SUSD3Q96L08 255 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 TPK1Q9H3S4 243 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 CCDC86Q9H6F5 360 aaKnown RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 USP29Q9HBJ7 922 aa5.39□□□□□ -1.55
PTPRD-202ENST00000356435 ZCCHC3Q9NUD5 404 aaKnown RBP5.39□□□□□ -1.55
PTPRD-202ENST00000356435 TLL2Q9Y6L7 1015 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms