RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 ISL1P61371 349 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 GPR155Q7Z3F1 870 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 CROCCP3Q8IVE0 287 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 CHPFQ8IZ52 775 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 CPA6Q8N4T0 437 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 ASPSCR1Q9BZE9 553 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 TMEFF2Q9UIK5 374 aaPredicted RBP21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 KIAA0100Q14667 2235 aaKnown RBP21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 ANKRD33BA6NCL7 494 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 UGT2B11O75310 529 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 PRNPP04156 253 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 ANXA4P09525 319 aaPredicted RBP21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 LAMP1P11279 417 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 POLR2IP36954 125 aaKnown RBP21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 HPCAL1P37235 193 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 BDKRB1P46663 353 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 CCSMST1Q4G0I0 132 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 BCL7AQ4VC05 210 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 MED27Q6P2C8 311 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 EIF3MQ7L2H7 374 aaKnown RBP21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 PARS2Q7L3T8 475 aaKnown RBP21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 DTD2Q96FN9 168 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 MTG2Q9H4K7 406 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 TPT1P8Q9HAU6 139 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 FANCEQ9HB96 536 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 ETAA1Q9NY74 926 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 U3KQV3 271 aa21.5■■□□□ 1.03
NKX2-1-201ENST00000354822 DNAJB5O75953 348 aa21.49■■□□□ 1.03
NKX2-1-201ENST00000354822 ATE1O95260 518 aa21.49■■□□□ 1.03
NKX2-1-201ENST00000354822 FABP3P05413 133 aa21.49■■□□□ 1.03
NKX2-1-201ENST00000354822 CD47Q08722 323 aa21.49■■□□□ 1.03
NKX2-1-201ENST00000354822 GRIN2CQ14957 1233 aa21.49■■□□□ 1.03
NKX2-1-201ENST00000354822 MEP1AQ16819 746 aa21.49■■□□□ 1.03
NKX2-1-201ENST00000354822 CAPN13Q6MZZ7 669 aaPredicted RBP21.49■■□□□ 1.03
NKX2-1-201ENST00000354822 PSRC1Q6PGN9 363 aaPredicted RBP21.49■■□□□ 1.03
NKX2-1-201ENST00000354822 CBLL1Q75N03 491 aa21.49■■□□□ 1.03
NKX2-1-201ENST00000354822 C1orf52Q8N6N3 182 aaKnown RBP21.49■■□□□ 1.03
NKX2-1-201ENST00000354822 KIAA1958Q8N8K9 716 aa21.49■■□□□ 1.03
NKX2-1-201ENST00000354822 SETD9Q8NE22 299 aa21.49■■□□□ 1.03
NKX2-1-201ENST00000354822 HUS1BQ8NHY5 278 aa21.49■■□□□ 1.03
NKX2-1-201ENST00000354822 COQ8BQ96D53 544 aa21.49■■□□□ 1.03
NKX2-1-201ENST00000354822 CXorf40BQ96DE9 158 aa21.49■■□□□ 1.03
NKX2-1-201ENST00000354822 COQ10AQ96MF6 247 aa21.49■■□□□ 1.03
NKX2-1-201ENST00000354822 OCEL1Q9H607 264 aa21.49■■□□□ 1.03
NKX2-1-201ENST00000354822 MGAT4DA6NG13 374 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 GABRR3A8MPY1 467 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 C1orf105O95561 183 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 DNAJA1P31689 397 aaKnown RBP21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 RAE1P78406 368 aaKnown RBP21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 PPP1R8Q12972 351 aaKnown RBP21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 POM121L1PQ3SYA9 428 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 SLCO4C1Q6ZQN7 724 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 PTOV1Q86YD1 416 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 SPARTQ8N0X7 666 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 LILRA3Q8N6C8 439 aaPredicted RBP21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 CELF5Q8N6W0 485 aaKnown RBP21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 PIK3C3Q8NEB9 887 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 CDC26Q8NHZ8 85 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 SIRT5Q9NXA8 310 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 SLC27A6Q9Y2P4 619 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 HCFC2Q9Y5Z7 792 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 HSPE1-MOB4S4R3N1 261 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 KPNA3O00505 521 aaPredicted RBP21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 SEMG1P04279 462 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 CCDC159P0C7I6 412 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 ADH5P11766 374 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 IL7RP16871 459 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 IGFBP5P24593 272 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 PDHA2P29803 388 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 NTHL1P78549 312 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 UBE3AQ05086 875 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 XAF1Q6GPH4 301 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 GALNT18Q6P9A2 607 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 CLECL1Q8IZS7 167 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 THAP11Q96EK4 314 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 TRIT1Q9H3H1 467 aaKnown RBP21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 CIDEBQ9UHD4 219 aa21.48■■□□□ 1.03
NKX2-1-201ENST00000354822 ABCB1P08183 1280 aaPredicted RBP21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 ZNF658BQ4V348 819 aaPredicted RBP21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 ZNF765Q7L2R6 523 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 PIWIL3Q7Z3Z3 882 aaKnown RBP21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 GRASPQ7Z6J2 395 aaPredicted RBP21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 SYNPOQ8N3V7 929 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 OR10Q1Q8NGQ4 319 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 PHOSPHO2Q8TCD6 241 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 FBLIM1Q8WUP2 373 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 SH3KBP1Q96B97 665 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 WDR34Q96EX3 536 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 DCUN1D5Q9BTE7 237 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 PLGRKTQ9HBL7 147 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 PRM3Q9NNZ6 103 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 SNX5Q9Y5X3 404 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 FOXE1O00358 373 aaPredicted RBP21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 BCKDKO14874 412 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 HOXC11O43248 304 aaPredicted RBP21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 DPM1O60762 260 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 ETHE1O95571 254 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 ADH1CP00326 375 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 FPR1P21462 350 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 TIA1P31483 386 aaKnown RBP eCLIP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms