RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 SH3KBP1Q96B97 665 aa17.81■□□□□ 0.44
TRIM41-202ENST00000351937 NR1H4Q96RI1 486 aaPredicted RBP17.81■□□□□ 0.44
TRIM41-202ENST00000351937 PELI2Q9HAT8 420 aa17.81■□□□□ 0.44
TRIM41-202ENST00000351937 DMRT3Q9NQL9 472 aa17.81■□□□□ 0.44
TRIM41-202ENST00000351937 MAPRE3Q9UPY8 281 aa17.81■□□□□ 0.44
TRIM41-202ENST00000351937 AP3M1Q9Y2T2 418 aa17.81■□□□□ 0.44
TRIM41-202ENST00000351937 PLEKHM1Q9Y4G2 1056 aa17.81■□□□□ 0.44
TRIM41-202ENST00000351937 A0A1W2PPC1 479 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 PRSS38A1L453 326 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 MAP3K13O43283 966 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 LRATO95237 230 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 HNRNPA2B1P22626 353 aaKnown RBP17.8■□□□□ 0.44
TRIM41-202ENST00000351937 ASMTP46597 345 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 CLDN2P57739 230 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 MTPNP58546 118 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 RAE1P78406 368 aaKnown RBP17.8■□□□□ 0.44
TRIM41-202ENST00000351937 MTAPQ13126 283 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 PGS1Q32NB8 556 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 UAP1L1Q3KQV9 507 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 GALNT18Q6P9A2 607 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 PROSER1Q86XN7 944 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 SPPL2CQ8IUH8 684 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 LILRA2Q8N149 483 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 SLCO4A1Q96BD0 722 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 TAC3Q9UHF0 121 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 KIR3DL1P43629 444 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 HNRNPFP52597 415 aaKnown RBP17.8■□□□□ 0.44
TRIM41-202ENST00000351937 AQP4P55087 323 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 NFATC4Q14934 902 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 LRIF1Q5T3J3 769 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 TMIGD1Q6UXZ0 262 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 CAMK1GQ96NX5 476 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 OR2M4Q96R27 311 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 PKP2Q99959 881 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 CARS2Q9HA77 564 aaKnown RBP17.8■□□□□ 0.44
TRIM41-202ENST00000351937 SERHLQ9NQF3 203 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 IMP3Q9NV31 184 aaKnown RBP17.8■□□□□ 0.44
TRIM41-202ENST00000351937 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.8■□□□□ 0.44
TRIM41-202ENST00000351937 PCDHB3Q9Y5E6 796 aa17.8■□□□□ 0.44
TRIM41-202ENST00000351937 A0A096LPI6 279 aa17.79■□□□□ 0.44
TRIM41-202ENST00000351937 MAN2B1O00754 1011 aa17.79■□□□□ 0.44
TRIM41-202ENST00000351937 APBB3O95704 486 aa17.79■□□□□ 0.44
TRIM41-202ENST00000351937 LYNP07948 512 aa17.79■□□□□ 0.44
TRIM41-202ENST00000351937 HTR1BP28222 390 aa17.79■□□□□ 0.44
TRIM41-202ENST00000351937 MEF2AQ02078 507 aaPredicted RBP17.79■□□□□ 0.44
TRIM41-202ENST00000351937 TDGQ13569 410 aa17.79■□□□□ 0.44
TRIM41-202ENST00000351937 SELPLGQ14242 412 aa17.79■□□□□ 0.44
TRIM41-202ENST00000351937 CLCA4Q14CN2 919 aa17.79■□□□□ 0.44
TRIM41-202ENST00000351937 RUNDC3AQ59EK9 446 aa17.79■□□□□ 0.44
TRIM41-202ENST00000351937 HMGB4Q8WW32 186 aa17.79■□□□□ 0.44
TRIM41-202ENST00000351937 BMFQ96LC9 184 aa17.79■□□□□ 0.44
TRIM41-202ENST00000351937 ACAT2Q9BWD1 397 aa17.79■□□□□ 0.44
TRIM41-202ENST00000351937 RAB11FIP5Q9BXF6 653 aa17.79■□□□□ 0.44
TRIM41-202ENST00000351937 PAIP1Q9H074 479 aaKnown RBP17.79■□□□□ 0.44
TRIM41-202ENST00000351937 SPNS1Q9H2V7 528 aa17.79■□□□□ 0.44
TRIM41-202ENST00000351937 MVB12BQ9H7P6 319 aa17.79■□□□□ 0.44
TRIM41-202ENST00000351937 WASH6PQ9NQA3 447 aa17.79■□□□□ 0.44
TRIM41-202ENST00000351937 ARMC1Q9NVT9 282 aa17.79■□□□□ 0.44
TRIM41-202ENST00000351937 SLC25A37Q9NYZ2 338 aa17.79■□□□□ 0.44
TRIM41-202ENST00000351937 TRBV5-3A0A0A0MS03 114 aa17.79■□□□□ 0.44
TRIM41-202ENST00000351937 ANXA4P09525 319 aaPredicted RBP17.79■□□□□ 0.44
TRIM41-202ENST00000351937 CXCR2P25025 360 aa17.79■□□□□ 0.44
TRIM41-202ENST00000351937 AP1ARQ63HQ0 302 aa17.79■□□□□ 0.44
TRIM41-202ENST00000351937 ENPP7Q6UWV6 458 aa17.79■□□□□ 0.44
TRIM41-202ENST00000351937 MSRB3Q8IXL7 192 aa17.79■□□□□ 0.44
TRIM41-202ENST00000351937 ABHD11Q8NFV4 315 aa17.79■□□□□ 0.44
TRIM41-202ENST00000351937 GFM2Q969S9 779 aaKnown RBP17.79■□□□□ 0.44
TRIM41-202ENST00000351937 POLMQ9NP87 494 aaPredicted RBP17.79■□□□□ 0.44
TRIM41-202ENST00000351937 CCM2LQ9NUG4 571 aaPredicted RBP17.79■□□□□ 0.44
TRIM41-202ENST00000351937 USP36Q9P275 1121 aaKnown RBP17.79■□□□□ 0.44
TRIM41-202ENST00000351937 ADGRE2Q9UHX3 823 aa17.79■□□□□ 0.44
TRIM41-202ENST00000351937 NDRG2Q9UN36 371 aaKnown RBP17.79■□□□□ 0.44
TRIM41-202ENST00000351937 PDZK1P1A8MUH7 402 aa17.78■□□□□ 0.44
TRIM41-202ENST00000351937 AKAP10O43572 662 aa17.78■□□□□ 0.44
TRIM41-202ENST00000351937 ZCCHC18P0CG32 403 aa17.78■□□□□ 0.44
TRIM41-202ENST00000351937 TIA1P31483 386 aaKnown RBP eCLIP17.78■□□□□ 0.44
TRIM41-202ENST00000351937 RAB28P51157 221 aa17.78■□□□□ 0.44
TRIM41-202ENST00000351937 KRT33BQ14525 404 aa17.78■□□□□ 0.44
TRIM41-202ENST00000351937 CCDC85BQ15834 202 aaPredicted RBP17.78■□□□□ 0.44
TRIM41-202ENST00000351937 UGT8Q16880 541 aa17.78■□□□□ 0.44
TRIM41-202ENST00000351937 TMEM102Q8N9M5 508 aaPredicted RBP17.78■□□□□ 0.44
TRIM41-202ENST00000351937 CATSPER1Q8NEC5 780 aa17.78■□□□□ 0.44
TRIM41-202ENST00000351937 OR8J2Q8NGG1 315 aa17.78■□□□□ 0.44
TRIM41-202ENST00000351937 WDR92Q96MX6 357 aa17.78■□□□□ 0.44
TRIM41-202ENST00000351937 THUMPD3Q9BV44 507 aaKnown RBP17.78■□□□□ 0.44
TRIM41-202ENST00000351937 EBF1Q9UH73 591 aa17.78■□□□□ 0.44
TRIM41-202ENST00000351937 A0A1W2PPV9 198 aa17.78■□□□□ 0.44
TRIM41-202ENST00000351937 SH3BGRLO75368 114 aa17.78■□□□□ 0.44
TRIM41-202ENST00000351937 CAPNS1P04632 268 aa17.78■□□□□ 0.44
TRIM41-202ENST00000351937 PTX3P26022 381 aaPredicted RBP17.78■□□□□ 0.44
TRIM41-202ENST00000351937 CYP4F3Q08477 520 aa17.78■□□□□ 0.44
TRIM41-202ENST00000351937 SKIV2LQ15477 1246 aaKnown RBP17.78■□□□□ 0.44
TRIM41-202ENST00000351937 SF1Q15637 639 aaKnown RBP17.78■□□□□ 0.44
TRIM41-202ENST00000351937 SMAD2Q15796 467 aaKnown RBP17.78■□□□□ 0.44
TRIM41-202ENST00000351937 TMEM132CQ8N3T6 1108 aa17.78■□□□□ 0.44
TRIM41-202ENST00000351937 LINC01555Q8NAE3 123 aa17.78■□□□□ 0.44
TRIM41-202ENST00000351937 ZNF740Q8NDX6 193 aa17.78■□□□□ 0.44
TRIM41-202ENST00000351937 ADCY4Q8NFM4 1077 aa17.78■□□□□ 0.44
TRIM41-202ENST00000351937 GPR156Q8NFN8 814 aa17.78■□□□□ 0.44
TRIM41-202ENST00000351937 CANT1Q8WVQ1 401 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms