RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 ZNF641Q96N77 438 aaPredicted RBP10.06□□□□□ -0.8
SMPD4-201ENST00000351288 PRAP1Q96NZ9 151 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 ZSCAN5AQ9BUG6 496 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 SORBS1Q9BX66 1292 aaKnown RBP10.06□□□□□ -0.8
SMPD4-201ENST00000351288 NUSAP1Q9BXS6 441 aaKnown RBP10.06□□□□□ -0.8
SMPD4-201ENST00000351288 AMBNQ9NP70 447 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 EQTNQ9NQ60 294 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 TM7SF3Q9NS93 570 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 FBXO10Q9UK96 956 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 RAB23Q9ULC3 237 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 FAM32AQ9Y421 112 aaKnown RBP10.06□□□□□ -0.8
SMPD4-201ENST00000351288 PCDHGA8Q9Y5G5 932 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 ALPK2Q86TB3 2170 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 ANKRD28O15084 1053 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 OR1F1O43749 312 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 KLK1P06870 262 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 CDK9P50750 372 aaKnown RBP10.06□□□□□ -0.8
SMPD4-201ENST00000351288 RPL26P61254 145 aaKnown RBP10.06□□□□□ -0.8
SMPD4-201ENST00000351288 HSPB3Q12988 150 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 CPTPQ5TA50 214 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 ZNF740Q8NDX6 193 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 SMARCD2Q92925 531 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 RELTQ969Z4 430 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 SMAD5Q99717 465 aaKnown RBP10.06□□□□□ -0.8
SMPD4-201ENST00000351288 YIPF2Q9BWQ6 316 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 TMEM245Q9H330 911 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 RC3H2Q9HBD1 1191 aaKnown RBP10.06□□□□□ -0.8
SMPD4-201ENST00000351288 ZIM2Q9NZV7 527 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 OARD1Q9Y530 152 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 GBF1Q92538 1859 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 A0A0J9YVX5 310 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 FEZF1A0PJY2 475 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 ARHGEF33A8MVX0 844 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 UPK1AO00322 258 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 KLK8O60259 260 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 C8GP07360 202 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 IDH2P48735 452 aaKnown RBP10.06□□□□□ -0.8
SMPD4-201ENST00000351288 B4GALNT1Q00973 533 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 KLHL35Q6PF15 583 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 ADIPOR2Q86V24 386 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 BTN2A2Q8WVV5 523 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 ATL1Q8WXF7 558 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 ZNF689Q96CS4 500 aaPredicted RBP10.06□□□□□ -0.8
SMPD4-201ENST00000351288 ALG14Q96F25 216 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 CCM2Q9BSQ5 444 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 YIPF4Q9BSR8 244 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 PBX4Q9BYU1 374 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 VPS29Q9UBQ0 182 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 PTBP2Q9UKA9 531 aaKnown RBP10.06□□□□□ -0.8
SMPD4-201ENST00000351288 ACSL6Q9UKU0 697 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 NEUROG3Q9Y4Z2 214 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 OR51B4Q9Y5P0 310 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 SNX5Q9Y5X3 404 aa10.06□□□□□ -0.8
SMPD4-201ENST00000351288 H3BMQ9 156 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 CXCR6O00574 342 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 FZD6O60353 706 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 TPST2O60704 377 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 PRSS23O95084 383 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 THRBP10828 461 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 TNFRSF1BP20333 461 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 PTNP21246 168 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 EPHA2P29317 976 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 FMO3P31513 532 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 ELP6Q0PNE2 266 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 KCNAB2Q13303 367 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 PRAMEF14Q5SWL7 426 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 EGFLAMQ63HQ2 1017 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 PDE12Q6L8Q7 609 aaKnown RBP10.05□□□□□ -0.8
SMPD4-201ENST00000351288 TNFAIP8L2Q6P589 184 aaPredicted RBP10.05□□□□□ -0.8
SMPD4-201ENST00000351288 PIWIL3Q7Z3Z3 882 aaKnown RBP10.05□□□□□ -0.8
SMPD4-201ENST00000351288 ZNF557Q8N988 423 aaPredicted RBP10.05□□□□□ -0.8
SMPD4-201ENST00000351288 OR4A15Q8NGL6 344 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 HMGB4Q8WW32 186 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 COG8Q96MW5 612 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 SH3GL1Q99961 368 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 AMBRA1Q9C0C7 1298 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 EPB41L1Q9H4G0 881 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 SYNDIG1Q9H7V2 258 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 HS3ST2Q9Y278 367 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 COL4A4P53420 1690 aaPredicted RBP10.05□□□□□ -0.8
SMPD4-201ENST00000351288 FADS2P1A8MWK0 482 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 PRAMEF4O60810 478 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 RASGRP1O95267 797 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 EEFSECP57772 596 aaKnown RBP10.05□□□□□ -0.8
SMPD4-201ENST00000351288 ATP1A4Q13733 1029 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 PRAMEF9Q5VWM5 478 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 NEK5Q6P3R8 708 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 Q6ZNB5 142 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 SPRED1Q7Z699 444 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 PATL1Q86TB9 770 aaKnown RBP10.05□□□□□ -0.8
SMPD4-201ENST00000351288 C17orf64Q86WR6 236 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 CPXM2Q8N436 756 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 RAB42Q8N4Z0 105 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 OR5AR1Q8NGP9 310 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 MAL2Q969L2 176 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 TIFAQ96CG3 184 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 LRRC3BQ96PB8 259 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 MIR1-1HGQ9H1L0 117 aa10.05□□□□□ -0.8
SMPD4-201ENST00000351288 CCDC177Q9NQR7 707 aaPredicted RBP10.05□□□□□ -0.8
SMPD4-201ENST00000351288 SAGE1Q9NXZ1 904 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms