RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 ADNP2Q6IQ32 1131 aa17.95■□□□□ 0.46
PTN-201ENST00000348225 PGM2L1Q6PCE3 622 aa17.95■□□□□ 0.46
PTN-201ENST00000348225 RETREG3Q86VR2 466 aa17.95■□□□□ 0.46
PTN-201ENST00000348225 SLC22A18Q96BI1 424 aa17.95■□□□□ 0.46
PTN-201ENST00000348225 SLC45A3Q96JT2 553 aa17.95■□□□□ 0.46
PTN-201ENST00000348225 HOPXQ9BPY8 73 aaPredicted RBP17.95■□□□□ 0.46
PTN-201ENST00000348225 DUSP15Q9H1R2 295 aaPredicted RBP17.95■□□□□ 0.46
PTN-201ENST00000348225 RHBGQ9H310 441 aa17.95■□□□□ 0.46
PTN-201ENST00000348225 SRMSQ9H3Y6 488 aa17.95■□□□□ 0.46
PTN-201ENST00000348225 DENND2DQ9H6A0 471 aaPredicted RBP17.95■□□□□ 0.46
PTN-201ENST00000348225 MRPS30Q9NP92 439 aaKnown RBP17.95■□□□□ 0.46
PTN-201ENST00000348225 EML5Q05BV3 1969 aa17.95■□□□□ 0.46
PTN-201ENST00000348225 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 ANKDD1BA6NHY2 528 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 H7BY64 318 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 PRICKLE3O43900 615 aaPredicted RBP17.94■□□□□ 0.46
PTN-201ENST00000348225 IL6P05231 212 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 CHRM5P08912 532 aaPredicted RBP17.94■□□□□ 0.46
PTN-201ENST00000348225 NME1P15531 152 aaKnown RBP17.94■□□□□ 0.46
PTN-201ENST00000348225 HRH2P25021 359 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 MAOBP27338 520 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 GRK3P35626 688 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 FOXM1Q08050 763 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 ELOCQ15369 112 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 ADCK2Q7Z695 626 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 TMEFF1Q8IYR6 380 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 ZNF740Q8NDX6 193 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 OR4E2Q8NGC2 313 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 VPS33AQ96AX1 596 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 PRAP1Q96NZ9 151 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 CDRT15Q96T59 188 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 LRRC61Q9BV99 259 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 RASSF4Q9H2L5 321 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 SPAG4Q9NPE6 437 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 CPNE7Q9UBL6 633 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 PRDM4Q9UKN5 801 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 ISM1B1AKI9 464 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 PRMT3O60678 531 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 PDE5AO76074 875 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 ETHE1O95571 254 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 ATP6V1G2O95670 118 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 PTX3P26022 381 aaPredicted RBP17.94■□□□□ 0.46
PTN-201ENST00000348225 UBE2IP63279 158 aaKnown RBP17.94■□□□□ 0.46
PTN-201ENST00000348225 YBX1P67809 324 aaKnown RBP17.94■□□□□ 0.46
PTN-201ENST00000348225 CSNK1G2P78368 415 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 DMWDQ09019 674 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 SF1Q15637 639 aaKnown RBP17.94■□□□□ 0.46
PTN-201ENST00000348225 C1orf146Q5VVC0 180 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 LAYNQ6UX15 382 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 SYT12Q8IV01 421 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 RBM12BQ8IXT5 1001 aaKnown RBP17.94■□□□□ 0.46
PTN-201ENST00000348225 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.94■□□□□ 0.46
PTN-201ENST00000348225 TBC1D19Q8N5T2 526 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 C1orf52Q8N6N3 182 aaKnown RBP17.94■□□□□ 0.46
PTN-201ENST00000348225 TTLQ8NG68 377 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 OR2L3Q8NG85 312 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 CHTF18Q8WVB6 975 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 DNASE2BQ8WZ79 361 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 TSSK3Q96PN8 268 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 CLMPQ9H6B4 373 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 TMEM184CQ9NVA4 438 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 MAP10Q9P2G4 905 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 BAIAP2L1Q9UHR4 511 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 PCDHGA7Q9Y5G6 932 aa17.94■□□□□ 0.46
PTN-201ENST00000348225 COL6A3P12111 3177 aa17.93■□□□□ 0.46
PTN-201ENST00000348225 FAM221BA6H8Z2 402 aa17.93■□□□□ 0.46
PTN-201ENST00000348225 NPPAP01160 153 aa17.93■□□□□ 0.46
PTN-201ENST00000348225 CELA2BP08218 269 aaPredicted RBP17.93■□□□□ 0.46
PTN-201ENST00000348225 PEBP1P30086 187 aaKnown RBP17.93■□□□□ 0.46
PTN-201ENST00000348225 C1orf61Q13536 156 aa17.93■□□□□ 0.46
PTN-201ENST00000348225 NFYCQ13952 458 aa17.93■□□□□ 0.46
PTN-201ENST00000348225 KIR2DS3Q14952 304 aa17.93■□□□□ 0.46
PTN-201ENST00000348225 KPNB1Q14974 876 aaKnown RBP17.93■□□□□ 0.46
PTN-201ENST00000348225 C8orf82Q6P1X6 216 aaPredicted RBP17.93■□□□□ 0.46
PTN-201ENST00000348225 SLC9B2Q86UD5 537 aa17.93■□□□□ 0.46
PTN-201ENST00000348225 CLHC1Q8NHS4 586 aa17.93■□□□□ 0.46
PTN-201ENST00000348225 JPH3Q8WXH2 748 aaPredicted RBP17.93■□□□□ 0.46
PTN-201ENST00000348225 STARD8Q92502 1023 aa17.93■□□□□ 0.46
PTN-201ENST00000348225 EBPLQ9BY08 206 aa17.93■□□□□ 0.46
PTN-201ENST00000348225 SIRT5Q9NXA8 310 aa17.93■□□□□ 0.46
PTN-201ENST00000348225 SPHK1Q9NYA1 384 aa17.93■□□□□ 0.46
PTN-201ENST00000348225 ADA2Q9NZK5 511 aa17.93■□□□□ 0.46
PTN-201ENST00000348225 MAPRE3Q9UPY8 281 aa17.93■□□□□ 0.46
PTN-201ENST00000348225 TRBC2A0A5B9 178 aa17.92■□□□□ 0.46
PTN-201ENST00000348225 ASPDHA6ND91 283 aa17.92■□□□□ 0.46
PTN-201ENST00000348225 TGFB1P01137 390 aa17.92■□□□□ 0.46
PTN-201ENST00000348225 PRPS1L1P21108 318 aa17.92■□□□□ 0.46
PTN-201ENST00000348225 GSTM2P28161 218 aa17.92■□□□□ 0.46
PTN-201ENST00000348225 TIA1P31483 386 aaKnown RBP eCLIP17.92■□□□□ 0.46
PTN-201ENST00000348225 ASMTP46597 345 aa17.92■□□□□ 0.46
PTN-201ENST00000348225 NXPH1P58417 271 aa17.92■□□□□ 0.46
PTN-201ENST00000348225 GPR18Q14330 331 aa17.92■□□□□ 0.46
PTN-201ENST00000348225 TLR1Q15399 786 aa17.92■□□□□ 0.46
PTN-201ENST00000348225 PIGGQ5H8A4 983 aa17.92■□□□□ 0.46
PTN-201ENST00000348225 GALNT18Q6P9A2 607 aa17.92■□□□□ 0.46
PTN-201ENST00000348225 GKN2Q86XP6 184 aa17.92■□□□□ 0.46
PTN-201ENST00000348225 MINDY1Q8N5J2 469 aa17.92■□□□□ 0.46
PTN-201ENST00000348225 AVL9Q8NBF6 648 aa17.92■□□□□ 0.46
PTN-201ENST00000348225 FAM46DQ8NEK8 389 aa17.92■□□□□ 0.46
PTN-201ENST00000348225 GPR156Q8NFN8 814 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms