RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 ZNF704Q6ZNC4 412 aaPredicted RBP7.09□□□□□ -1.27
ZNF540-202ENST00000343599 C1orf122Q6ZSJ8 110 aa7.09□□□□□ -1.27
ZNF540-202ENST00000343599 KIAA0408Q6ZU52 694 aa7.09□□□□□ -1.27
ZNF540-202ENST00000343599 RTL3Q8N8U3 475 aaKnown RBP7.09□□□□□ -1.27
ZNF540-202ENST00000343599 ZNF514Q96K75 400 aaPredicted RBP7.09□□□□□ -1.27
ZNF540-202ENST00000343599 APOOQ9BUR5 198 aa7.09□□□□□ -1.27
ZNF540-202ENST00000343599 SMOC1Q9H4F8 434 aa7.09□□□□□ -1.27
ZNF540-202ENST00000343599 TRIM45Q9H8W5 580 aaPredicted RBP7.09□□□□□ -1.27
ZNF540-202ENST00000343599 CYP4F12Q9HCS2 524 aa7.09□□□□□ -1.27
ZNF540-202ENST00000343599 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.09□□□□□ -1.27
ZNF540-202ENST00000343599 ANAPC5Q9UJX4 755 aa7.09□□□□□ -1.27
ZNF540-202ENST00000343599 PSME2Q9UL46 239 aa7.09□□□□□ -1.27
ZNF540-202ENST00000343599 SNX7Q9UNH6 387 aa7.09□□□□□ -1.27
ZNF540-202ENST00000343599 HEBP2Q9Y5Z4 205 aa7.09□□□□□ -1.27
ZNF540-202ENST00000343599 PRUNE2Q8WUY3 3088 aa7.09□□□□□ -1.27
ZNF540-202ENST00000343599 SDR42E2A6NKP2 422 aa7.09□□□□□ -1.28
ZNF540-202ENST00000343599 NOL3O60936 208 aaKnown RBP7.09□□□□□ -1.28
ZNF540-202ENST00000343599 USP12O75317 370 aa7.09□□□□□ -1.28
ZNF540-202ENST00000343599 CDK14O94921 469 aa7.09□□□□□ -1.28
ZNF540-202ENST00000343599 SLITRK5O94991 958 aa7.09□□□□□ -1.28
ZNF540-202ENST00000343599 TRUB2O95900 331 aaKnown RBP7.09□□□□□ -1.28
ZNF540-202ENST00000343599 KRT8P05787 483 aa7.09□□□□□ -1.28
ZNF540-202ENST00000343599 MTHFD1P11586 935 aaKnown RBP7.09□□□□□ -1.28
ZNF540-202ENST00000343599 PIK3R1P27986 724 aa7.09□□□□□ -1.28
ZNF540-202ENST00000343599 HSD17B2P37059 387 aa7.09□□□□□ -1.28
ZNF540-202ENST00000343599 ETV4P43268 484 aa7.09□□□□□ -1.28
ZNF540-202ENST00000343599 CACNG1Q06432 222 aa7.09□□□□□ -1.28
ZNF540-202ENST00000343599 TCEA2Q15560 299 aa7.09□□□□□ -1.28
ZNF540-202ENST00000343599 ESCO2Q56NI9 601 aa7.09□□□□□ -1.28
ZNF540-202ENST00000343599 YIF1BQ5BJH7 314 aa7.09□□□□□ -1.28
ZNF540-202ENST00000343599 ATG16L1Q676U5 607 aa7.09□□□□□ -1.28
ZNF540-202ENST00000343599 ABRAXAS1Q6UWZ7 409 aa7.09□□□□□ -1.28
ZNF540-202ENST00000343599 RAB11FIP2Q7L804 512 aa7.09□□□□□ -1.28
ZNF540-202ENST00000343599 SLC22A16Q86VW1 577 aa7.09□□□□□ -1.28
ZNF540-202ENST00000343599 SLC13A5Q86YT5 568 aaPredicted RBP7.09□□□□□ -1.28
ZNF540-202ENST00000343599 OR13F1Q8NGS4 319 aa7.09□□□□□ -1.28
ZNF540-202ENST00000343599 SLC22A8Q8TCC7 542 aa7.09□□□□□ -1.28
ZNF540-202ENST00000343599 TCP10LQ8TDR4 215 aa7.09□□□□□ -1.28
ZNF540-202ENST00000343599 P2RY11Q96G91 374 aa7.09□□□□□ -1.28
ZNF540-202ENST00000343599 NAA50Q9GZZ1 169 aaKnown RBP7.09□□□□□ -1.28
ZNF540-202ENST00000343599 VPS37BQ9H9H4 285 aa7.09□□□□□ -1.28
ZNF540-202ENST00000343599 MRM3Q9HC36 420 aaKnown RBP7.09□□□□□ -1.28
ZNF540-202ENST00000343599 MRPL39Q9NYK5 338 aaKnown RBP7.09□□□□□ -1.28
ZNF540-202ENST00000343599 PSMC3IPQ9P2W1 217 aaPredicted RBP7.09□□□□□ -1.28
ZNF540-202ENST00000343599 VWA7Q9Y334 891 aa7.09□□□□□ -1.28
ZNF540-202ENST00000343599 LOXL2Q9Y4K0 774 aa7.09□□□□□ -1.28
ZNF540-202ENST00000343599 A0A0X1KG70 313 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 ISPDA4D126 451 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 POC1B-GALNT4F8VUJ3 575 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 MAN1A2O60476 641 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 ADAM11O75078 769 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 ALBP02768 609 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 CALB1P05937 261 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 IMPDH1P20839 514 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 RBL1P28749 1068 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 GARSP41250 739 aaKnown RBP7.08□□□□□ -1.28
ZNF540-202ENST00000343599 GPR85P60893 370 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 OTUD4Q01804 1114 aaKnown RBP7.08□□□□□ -1.28
ZNF540-202ENST00000343599 TCHHL1Q5QJ38 904 aaPredicted RBP7.08□□□□□ -1.28
ZNF540-202ENST00000343599 RNASEH2BQ5TBB1 312 aaKnown RBP7.08□□□□□ -1.28
ZNF540-202ENST00000343599 SEL1L2Q5TEA6 688 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 OTUD1Q5VV17 481 aaPredicted RBP7.08□□□□□ -1.28
ZNF540-202ENST00000343599 SLC6A19Q695T7 634 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 TAC4Q86UU9 113 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 GPALPP1Q8IXQ4 340 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 PARP8Q8N3A8 854 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 MFSD4AQ8N468 514 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 SNX31Q8N9S9 440 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 OR7D4Q8NG98 312 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 MZB1Q8WU39 189 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 PKP2Q99959 881 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 TMEM246Q9BRR3 403 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 HEMGNQ9BXL5 484 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 SIRT5Q9NXA8 310 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.08□□□□□ -1.28
ZNF540-202ENST00000343599 DIMT1Q9UNQ2 313 aaKnown RBP7.08□□□□□ -1.28
ZNF540-202ENST00000343599 GPR34Q9UPC5 381 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 CAB39Q9Y376 341 aaPredicted RBP7.08□□□□□ -1.28
ZNF540-202ENST00000343599 A0A1W2PQU0 124 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 TCRBV7S2A1N4TA0A589 114 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 PCP4L1A6NKN8 68 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 C12orf71A8MTZ7 269 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 E5RJQ4 531 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 RAD1O60671 282 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 PRAMEF11O60813 436 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 OR7A10O76100 309 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 HMGN1P05114 100 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 EPHA3P29320 983 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 SSTR2P30874 369 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 VIPR1P32241 457 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 IGFALSP35858 605 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 RUNX1T1Q06455 604 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 PPP3CAQ08209 521 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 EFEMP1Q12805 493 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 IFRD2Q12894 506 aaPredicted RBP7.08□□□□□ -1.28
ZNF540-202ENST00000343599 NME3Q13232 169 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 LPAL2Q16609 132 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 DHRS13Q6UX07 377 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 UNC5DQ6UXZ4 953 aa7.08□□□□□ -1.28
ZNF540-202ENST00000343599 Q6ZSR6 202 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms