RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 TFAP2CQ92754 450 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 REPS1Q96D71 796 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 MSLNLQ96KJ4 702 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 FCRL1Q96LA6 429 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 SEPHS2Q99611 448 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 IKZF5Q9H5V7 419 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 RMND5AQ9H871 391 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 PHPT1Q9NRX4 125 aaPredicted RBP17.94■□□□□ 0.46
HOXA9-201ENST00000343483 SLC6A13Q9NSD5 602 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 PNPLA3Q9NST1 481 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 RUVBL1Q9Y265 456 aaKnown RBP17.94■□□□□ 0.46
HOXA9-201ENST00000343483 ANHXE9PGG2 379 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 PLOD2O00469 737 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 PLRG1O43660 514 aaKnown RBP17.94■□□□□ 0.46
HOXA9-201ENST00000343483 MYO1DO94832 1006 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 ETS2P15036 469 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 NELFEP18615 380 aaKnown RBP17.94■□□□□ 0.46
HOXA9-201ENST00000343483 PRPS1L1P21108 318 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 KELP23276 732 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 TRIM23P36406 574 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 MEF2AQ02078 507 aaPredicted RBP17.94■□□□□ 0.46
HOXA9-201ENST00000343483 TMTC4Q5T4D3 741 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 C1orf52Q8N6N3 182 aaKnown RBP17.94■□□□□ 0.46
HOXA9-201ENST00000343483 OR10A6Q8NH74 314 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 SLC5A11Q8WWX8 675 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 NCSTNQ92542 709 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 ITCHQ96J02 903 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 EFCAB11Q9BUY7 163 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 C1QTNF2Q9BXJ5 285 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 CKAP5Q14008 2032 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 TICRRQ7Z2Z1 1910 aa17.94■□□□□ 0.46
HOXA9-201ENST00000343483 TRPM6Q9BX84 2022 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 A0A1B0GTW7 788 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 A0A1W2PQF6 199 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 RNGTTO60942 597 aaKnown RBP17.93■□□□□ 0.46
HOXA9-201ENST00000343483 H6PDO95479 791 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 GSNP06396 782 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 SLC35G4P0C7Q5 338 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 C1GALT1C1LP0DN25 315 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 ACP5P13686 325 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 COL9A1P20849 921 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 ADPRHP54922 357 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 RPS13P62277 151 aaKnown RBP17.93■□□□□ 0.46
HOXA9-201ENST00000343483 PAGE2BQ5JRK9 111 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 ATG9BQ674R7 924 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 RBM44Q6ZP01 1051 aaKnown RBP17.93■□□□□ 0.46
HOXA9-201ENST00000343483 SPRED1Q7Z699 444 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 GPR180Q86V85 440 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 DTWD1Q8N5C7 304 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 SMRP1Q8NCR6 262 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 TSPAN14Q8NG11 270 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 OR2T12Q8NG77 320 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 ZNF583Q96ND8 569 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 MYOCQ99972 504 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 INPP5KQ9BT40 448 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 SLC17A9Q9BYT1 436 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 PAIP1Q9H074 479 aaKnown RBP17.93■□□□□ 0.46
HOXA9-201ENST00000343483 OSGEPL1Q9H4B0 414 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 CAAP1Q9H8G2 361 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 SERHLQ9NQF3 203 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 PCDHB14Q9Y5E9 798 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 PIAS3Q9Y6X2 628 aa17.93■□□□□ 0.46
HOXA9-201ENST00000343483 TBC1D3DA0A087WVF3 549 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 TBC1D3IA0A087WXS9 549 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 TBC1D3EA0A087X179 549 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 TBC1D3KA0A087X1G2 549 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 PIPSLA2A3N6 862 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 TBC1D3FA6NER0 549 aaPredicted RBP17.92■□□□□ 0.46
HOXA9-201ENST00000343483 TBC1D3LB9A6J9 549 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 DLGAP1O14490 977 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 ACOX3O15254 700 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 RASAL1O95294 804 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 MT-ND1P03886 318 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 TBC1D3HP0C7X1 549 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 PCSK2P16519 638 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 KIR3DL1P43629 444 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 CLCNKAP51800 687 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 E2F2Q14209 437 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 PRAMEF14Q5SWL7 426 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 PRAMEF13Q5VWM6 474 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 TBC1D3GQ6DHY5 549 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 OR4F3Q6IEY1 312 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 TBC1D3CQ6IPX1 549 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 KIAA1161Q6NSJ0 714 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 TBC1D3Q8IZP1 549 aaPredicted RBP17.92■□□□□ 0.46
HOXA9-201ENST00000343483 OR7A2PQ8NGA2 310 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 OR5K2Q8NHB8 316 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 DGCR14Q96DF8 476 aaKnown RBP17.92■□□□□ 0.46
HOXA9-201ENST00000343483 AURKBQ96GD4 344 aaPredicted RBP17.92■□□□□ 0.46
HOXA9-201ENST00000343483 RNF145Q96MT1 663 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 NECTIN4Q96NY8 510 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 NRTNQ99748 197 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 SH3GL1Q99961 368 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 ACAT2Q9BWD1 397 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 KCNH6Q9H252 994 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 UBE2ZQ9H832 354 aaPredicted RBP17.92■□□□□ 0.46
HOXA9-201ENST00000343483 FZD3Q9NPG1 666 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 C8orf4Q9NR00 106 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 MYRFQ9Y2G1 1151 aa17.92■□□□□ 0.46
HOXA9-201ENST00000343483 DNMT3AQ9Y6K1 912 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms