RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 ITPAQ9BY32 194 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.2■□□□□ 0.34
SMAD4-201ENST00000342988 NEDD8-MDP1E9PL57 170 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 M0R2N6 131 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 SERPINF1P36955 418 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 TSFMP43897 325 aaKnown RBP17.2■□□□□ 0.34
SMAD4-201ENST00000342988 ZNF367Q7RTV3 350 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 CMIPQ8IY22 773 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 SLC15A3Q8IY34 581 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 C7orf34Q96L11 122 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 SLC6A7Q99884 636 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 YIPF4Q9BSR8 244 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 ATG5Q9H1Y0 275 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 SOX9P48436 509 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 NRG1Q02297 640 aaPredicted RBP17.2■□□□□ 0.34
SMAD4-201ENST00000342988 FOXM1Q08050 763 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 RPL13AP3Q6NVV1 102 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 MAPK15Q8TD08 544 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 RGMAQ96B86 450 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 PTGES2Q9H7Z7 377 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 ZNF701Q9NV72 531 aaPredicted RBP17.2■□□□□ 0.34
SMAD4-201ENST00000342988 SNX10Q9Y5X0 201 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 LIASO43766 372 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 POU2F1P14859 743 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 LCP2Q13094 533 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 GLT8D1Q68CQ7 371 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 RPLP0P6Q8NHW5 317 aa17.2■□□□□ 0.34
SMAD4-201ENST00000342988 MZT1Q08AG7 82 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 CLEC12AQ5QGZ9 265 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 HOXB13Q92826 284 aaPredicted RBP17.19■□□□□ 0.34
SMAD4-201ENST00000342988 CPXM1Q96SM3 734 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 ADGRL2O95490 1459 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 IL7P13232 177 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 ZNF598Q86UK7 904 aaKnown RBP17.19■□□□□ 0.34
SMAD4-201ENST00000342988 ELMOD2Q8IZ81 293 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 RSC1A1Q92681 617 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 UNC93B1Q9H1C4 597 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 ST14Q9Y5Y6 855 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 TTLL10Q6ZVT0 673 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 ALDH16A1Q8IZ83 802 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 BSCL2Q96G97 398 aaPredicted RBP17.19■□□□□ 0.34
SMAD4-201ENST00000342988 FLRT1Q9NZU1 646 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 CHRNB2P17787 502 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 GSTM4Q03013 218 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 PTPRRQ15256 657 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 TMEM203Q969S6 136 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 URM1Q9BTM9 101 aaKnown RBP17.19■□□□□ 0.34
SMAD4-201ENST00000342988 RTFDC1Q9BY42 306 aaPredicted RBP17.19■□□□□ 0.34
SMAD4-201ENST00000342988 ARHGEF5Q12774 1597 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 TRAV6A0A075B6T7 132 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 RPP14O95059 124 aaKnown RBP17.19■□□□□ 0.34
SMAD4-201ENST00000342988 LCKP06239 509 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 TAS2R31P59538 309 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 SP2Q02086 613 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 MITD1Q8WV92 249 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 ALPK1Q96QP1 1244 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 MTG2Q9H4K7 406 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 RNASEH2AO75792 299 aaKnown RBP17.19■□□□□ 0.34
SMAD4-201ENST00000342988 MAMLD1Q13495 774 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 KIAA1161Q6NSJ0 714 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 NAPRTQ6XQN6 538 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 DPY19L4Q7Z388 723 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 SENP8Q96LD8 212 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 ZNF75AQ96N20 296 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 SYT3Q9BQG1 590 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 hCG_2039718K7EN88 272 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 C6orf120Q7Z4R8 191 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 TBX5Q99593 518 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 DEFB129Q9H1M3 183 aa17.19■□□□□ 0.34
SMAD4-201ENST00000342988 TULP2O00295 520 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 TROAPQ12815 778 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 DECR1Q16698 335 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 STYK1Q6J9G0 422 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 OR10A6Q8NH74 314 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 MGAT4CQ9UBM8 478 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 SPATS1Q496A3 300 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 OR2M4Q96R27 311 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 ACSS3Q9H6R3 686 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 TIMM13Q9Y5L4 95 aaPredicted RBP17.18■□□□□ 0.34
SMAD4-201ENST00000342988 CHATP28329 748 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 AFF3P51826 1226 aaKnown RBP17.18■□□□□ 0.34
SMAD4-201ENST00000342988 SLC26A9Q7LBE3 791 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 CASTOR1Q8WTX7 329 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 GAS2L1Q99501 681 aaPredicted RBP17.18■□□□□ 0.34
SMAD4-201ENST00000342988 DNAJB9Q9UBS3 223 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 ABCA9Q8IUA7 1624 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 RFPL1O75677 317 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 PTPRAP18433 802 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 PIGGQ5H8A4 983 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 CMTM1Q8IZ96 169 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 FAM84BQ96KN1 310 aaPredicted RBP17.18■□□□□ 0.34
SMAD4-201ENST00000342988 IPPKQ9H8X2 491 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 PLK2Q9NYY3 685 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 PCDHGA2Q9Y5H1 932 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 ZNF850A8MQ14 1090 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 RECQL4O94761 1208 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 SERPINA7P05543 415 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 CYP3A5P20815 502 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 PSMD8P48556 350 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 C19orf35Q6ZS72 473 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms