RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 RAE1P78406 368 aaKnown RBP19.43■□□□□ 0.7
SPG7-202ENST00000341316 DUOXA1Q1HG43 343 aa19.43■□□□□ 0.7
SPG7-202ENST00000341316 ZNF658BQ4V348 819 aaPredicted RBP19.43■□□□□ 0.7
SPG7-202ENST00000341316 RBM48Q5RL73 367 aaKnown RBP19.43■□□□□ 0.7
SPG7-202ENST00000341316 GRHL2Q6ISB3 625 aa19.43■□□□□ 0.7
SPG7-202ENST00000341316 SLC15A4Q8N697 577 aa19.43■□□□□ 0.7
SPG7-202ENST00000341316 NELL1Q92832 810 aa19.43■□□□□ 0.7
SPG7-202ENST00000341316 ZNF707Q96C28 371 aaPredicted RBP19.43■□□□□ 0.7
SPG7-202ENST00000341316 LRIG1Q96JA1 1093 aa19.43■□□□□ 0.7
SPG7-202ENST00000341316 SAMD11Q96NU1 681 aa19.43■□□□□ 0.7
SPG7-202ENST00000341316 PANX1Q96RD7 426 aa19.43■□□□□ 0.7
SPG7-202ENST00000341316 CSF3RQ99062 836 aa19.43■□□□□ 0.7
SPG7-202ENST00000341316 CORINQ9Y5Q5 1042 aa19.43■□□□□ 0.7
SPG7-202ENST00000341316 PRRT4C9JH25 899 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 H0YIV9 168 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 PLK4O00444 970 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 TLL1O43897 1013 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 XYLBO75191 536 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 CATP04040 527 aaKnown RBP19.42■□□□□ 0.7
SPG7-202ENST00000341316 SRPRAP08240 638 aaKnown RBP19.42■□□□□ 0.7
SPG7-202ENST00000341316 HLA-EP13747 358 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 VAC14Q08AM6 782 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 TUBA3CQ13748 450 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 GALNT18Q6P9A2 607 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 GALNT10Q86SR1 603 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 OR56A3Q8NH54 315 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 RAB2BQ8WUD1 216 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 BADQ92934 168 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 SDCCAG3Q96C92 435 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 NRBF2Q96F24 287 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 PYURFQ96I23 114 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 MAGEB10Q96LZ2 347 aaPredicted RBP19.42■□□□□ 0.7
SPG7-202ENST00000341316 MAGIXQ9H6Y5 334 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 SGK2Q9HBY8 427 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 FAM118AQ9NWS6 357 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 VNN3Q9NY84 501 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 PCDHGA8Q9Y5G5 932 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 U3KQV3 271 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 CLIC1O00299 241 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 QSOX1O00391 747 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 OCM2P0CE71 109 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 OCMP0CE72 109 aaPredicted RBP19.42■□□□□ 0.7
SPG7-202ENST00000341316 LAMP1P11279 417 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 COX7A2P14406 83 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 ENGP17813 658 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 DCTP40126 519 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 VIPR2P41587 438 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 CD97P48960 835 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 TPD52P55327 224 aaPredicted RBP19.42■□□□□ 0.7
SPG7-202ENST00000341316 SPIDRQ14159 915 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 ERAP2Q6P179 960 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 MSANTD1Q6ZTZ1 278 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 NLRP8Q86W28 1048 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 SPARTQ8N0X7 666 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 CENPSQ8N2Z9 138 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 ZFYVE19Q96K21 471 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 COQ10AQ96MF6 247 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 PSME2Q9UL46 239 aa19.42■□□□□ 0.7
SPG7-202ENST00000341316 SOBPA7XYQ1 873 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 GSTM2P28161 218 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 SLC6A11P48066 632 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 CCR3P51677 355 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 PLA2G16P53816 162 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 MLLT10P55197 1068 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 PIGFQ07326 219 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 ATP1A4Q13733 1029 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 SKIV2LQ15477 1246 aaKnown RBP19.41■□□□□ 0.7
SPG7-202ENST00000341316 MEP1AQ16819 746 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 GTF2IRD2BQ6EKJ0 949 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 ZCCHC8Q6NZY4 707 aaKnown RBP19.41■□□□□ 0.7
SPG7-202ENST00000341316 GTF2IRD2Q86UP8 949 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 SFTPA1Q8IWL2 248 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 KLHDC8AQ8IYD2 350 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 ZCCHC7Q8N3Z6 543 aaKnown RBP19.41■□□□□ 0.7
SPG7-202ENST00000341316 PJA1Q8NG27 643 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 HCAR2Q8TDS4 363 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 ATL1Q8WXF7 558 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 HDAC2Q92769 488 aaKnown RBP19.41■□□□□ 0.7
SPG7-202ENST00000341316 DTD2Q96FN9 168 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 GPN2Q9H9Y4 310 aaPredicted RBP19.41■□□□□ 0.7
SPG7-202ENST00000341316 MRPS23Q9Y3D9 190 aaKnown RBP19.41■□□□□ 0.7
SPG7-202ENST00000341316 REV3LO60673 3130 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 OTOL1A6NHN0 477 aaPredicted RBP19.41■□□□□ 0.7
SPG7-202ENST00000341316 SLC9A3R1O14745 358 aaPredicted RBP19.41■□□□□ 0.7
SPG7-202ENST00000341316 HNRNPA1P09651 372 aaKnown RBP eCLIP19.41■□□□□ 0.7
SPG7-202ENST00000341316 IL1RNP18510 177 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 TRPC1P48995 793 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 ACSM2AQ08AH3 577 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 NR1D2Q14995 579 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 TMEM240Q5SV17 173 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 TTC23Q5W5X9 447 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 ACSM2BQ68CK6 577 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 ZNF621Q6ZSS3 439 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 RTL10Q7L3V2 364 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 SERPINA11Q86U17 422 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 SVOPLQ8N434 492 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 C1orf52Q8N6N3 182 aaKnown RBP19.41■□□□□ 0.7
SPG7-202ENST00000341316 CHDHQ8NE62 594 aaPredicted RBP19.41■□□□□ 0.7
SPG7-202ENST00000341316 OR7G3Q8NG95 312 aa19.41■□□□□ 0.7
SPG7-202ENST00000341316 NEIL2Q969S2 332 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms