RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 DRC3Q9H069 523 aa15.42■□□□□ 0.06
NECTIN1-202ENST00000340882 DNAJB12Q9NXW2 375 aaKnown RBP15.42■□□□□ 0.06
NECTIN1-202ENST00000340882 LRFN1Q9P244 771 aa15.42■□□□□ 0.06
NECTIN1-202ENST00000340882 ST6GALNAC2Q9UJ37 374 aa15.42■□□□□ 0.06
NECTIN1-202ENST00000340882 TTC7AQ9ULT0 858 aaPredicted RBP15.42■□□□□ 0.06
NECTIN1-202ENST00000340882 JMJD1CQ15652 2540 aa15.41■□□□□ 0.06
NECTIN1-202ENST00000340882 AKR1B10O60218 316 aa15.41■□□□□ 0.06
NECTIN1-202ENST00000340882 NME2P1O60361 137 aa15.41■□□□□ 0.06
NECTIN1-202ENST00000340882 ZWINTO95229 277 aa15.41■□□□□ 0.06
NECTIN1-202ENST00000340882 NME2P22392 152 aa15.41■□□□□ 0.06
NECTIN1-202ENST00000340882 CHRNB4P30926 498 aa15.41■□□□□ 0.06
NECTIN1-202ENST00000340882 PTGS2P35354 604 aa15.41■□□□□ 0.06
NECTIN1-202ENST00000340882 RFC3P40938 356 aa15.41■□□□□ 0.06
NECTIN1-202ENST00000340882 EIF3EP60228 445 aaKnown RBP15.41■□□□□ 0.06
NECTIN1-202ENST00000340882 ADAM8P78325 824 aa15.41■□□□□ 0.06
NECTIN1-202ENST00000340882 MINDY4Q4G0A6 757 aa15.41■□□□□ 0.06
NECTIN1-202ENST00000340882 DARS2Q6PI48 645 aaKnown RBP15.41■□□□□ 0.06
NECTIN1-202ENST00000340882 SUSD1Q6UWL2 747 aa15.41■□□□□ 0.06
NECTIN1-202ENST00000340882 CDKL3Q8IVW4 592 aaPredicted RBP15.41■□□□□ 0.06
NECTIN1-202ENST00000340882 OR9A4Q8NGU2 314 aa15.41■□□□□ 0.06
NECTIN1-202ENST00000340882 ZNF778Q96MU6 729 aa15.41■□□□□ 0.06
NECTIN1-202ENST00000340882 KCNJ16Q9NPI9 418 aa15.41■□□□□ 0.06
NECTIN1-202ENST00000340882 MACROD2A1Z1Q3 448 aa15.4■□□□□ 0.06
NECTIN1-202ENST00000340882 SOWAHDA6NJG2 315 aa15.4■□□□□ 0.06
NECTIN1-202ENST00000340882 CTAG2O75638 210 aa15.4■□□□□ 0.06
NECTIN1-202ENST00000340882 SLC25A12O75746 678 aa15.4■□□□□ 0.06
NECTIN1-202ENST00000340882 APOA4P06727 396 aa15.4■□□□□ 0.06
NECTIN1-202ENST00000340882 CMPK1P30085 196 aa15.4■□□□□ 0.06
NECTIN1-202ENST00000340882 DLX5P56178 289 aa15.4■□□□□ 0.06
NECTIN1-202ENST00000340882 TCEAL1Q15170 157 aa15.4■□□□□ 0.06
NECTIN1-202ENST00000340882 EMC4Q5J8M3 183 aa15.4■□□□□ 0.06
NECTIN1-202ENST00000340882 MFSD4BQ5TF39 518 aa15.4■□□□□ 0.06
NECTIN1-202ENST00000340882 GARNL3Q5VVW2 1013 aa15.4■□□□□ 0.06
NECTIN1-202ENST00000340882 PLD3Q8IV08 490 aa15.4■□□□□ 0.06
NECTIN1-202ENST00000340882 EID3Q8N140 333 aa15.4■□□□□ 0.06
NECTIN1-202ENST00000340882 FAM98AQ8NCA5 519 aaKnown RBP15.4■□□□□ 0.06
NECTIN1-202ENST00000340882 M1APQ8TC57 530 aa15.4■□□□□ 0.06
NECTIN1-202ENST00000340882 SEC16BQ96JE7 1060 aa15.4■□□□□ 0.06
NECTIN1-202ENST00000340882 OLFM1Q99784 485 aa15.4■□□□□ 0.06
NECTIN1-202ENST00000340882 CDCP1Q9H5V8 836 aa15.4■□□□□ 0.06
NECTIN1-202ENST00000340882 MMP25Q9NPA2 562 aa15.4■□□□□ 0.06
NECTIN1-202ENST00000340882 TSR3Q9UJK0 312 aaKnown RBP15.4■□□□□ 0.06
NECTIN1-202ENST00000340882 PLEKHA6Q9Y2H5 1048 aa15.4■□□□□ 0.06
NECTIN1-202ENST00000340882 EML6Q6ZMW3 1958 aa15.39■□□□□ 0.05
NECTIN1-202ENST00000340882 PROM1O43490 865 aa15.39■□□□□ 0.05
NECTIN1-202ENST00000340882 KLK8O60259 260 aa15.39■□□□□ 0.05
NECTIN1-202ENST00000340882 FOSL1P15407 271 aa15.39■□□□□ 0.05
NECTIN1-202ENST00000340882 NUP107P57740 925 aa15.39■□□□□ 0.05
NECTIN1-202ENST00000340882 SNTB1Q13884 538 aaKnown RBP15.39■□□□□ 0.05
NECTIN1-202ENST00000340882 SKOR2Q2VWA4 1001 aaPredicted RBP15.39■□□□□ 0.05
NECTIN1-202ENST00000340882 CCDC181Q5TID7 509 aa15.39■□□□□ 0.05
NECTIN1-202ENST00000340882 ZNF425Q6IV72 752 aa15.39■□□□□ 0.05
NECTIN1-202ENST00000340882 TTC23LQ6PF05 361 aa15.39■□□□□ 0.05
NECTIN1-202ENST00000340882 KIF2BQ8N4N8 673 aa15.39■□□□□ 0.05
NECTIN1-202ENST00000340882 RND1Q92730 232 aa15.39■□□□□ 0.05
NECTIN1-202ENST00000340882 IQCDQ96DY2 449 aa15.39■□□□□ 0.05
NECTIN1-202ENST00000340882 ALS2CR12Q96Q35 445 aa15.39■□□□□ 0.05
NECTIN1-202ENST00000340882 MRPS30Q9NP92 439 aaKnown RBP15.39■□□□□ 0.05
NECTIN1-202ENST00000340882 KIAA1324LA8MWY0 1029 aaPredicted RBP15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 HS6ST1O60243 411 aa15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 CDC40O60508 579 aaKnown RBP eCLIP15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 VPS26AO75436 327 aa15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 STK10O94804 968 aaKnown RBP15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 SUN1O94901 812 aa15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 TPP2P29144 1249 aaPredicted RBP15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 PMPCAQ10713 525 aa15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 FAM53BQ14153 422 aa15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 SFT2D3Q587I9 215 aa15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 CMPK2Q5EBM0 449 aa15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 TMEM211Q6ICI0 200 aa15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 AADACL2Q6P093 401 aa15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 PAPD4Q6PIY7 484 aaKnown RBP15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 LUZP1Q86V48 1076 aa15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 PRIMA1Q86XR5 153 aa15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 OR52K1Q8NGK4 314 aa15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 OR51Q1Q8NH59 317 aa15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 SKA2Q8WVK7 121 aaPredicted RBP15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 DNAJC7Q99615 494 aa15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 MACROD1Q9BQ69 325 aa15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 GPATCH1Q9BRR8 931 aaKnown RBP15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 POLDIP3Q9BY77 421 aaKnown RBP15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 LRRC40Q9H9A6 602 aa15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 HCN3Q9P1Z3 774 aa15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 MARCH4Q9P2E8 410 aaPredicted RBP15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 C19orf25Q9UFG5 118 aaPredicted RBP15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 PCYOX1Q9UHG3 505 aa15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 L3MBTL1Q9Y468 752 aa15.38■□□□□ 0.05
NECTIN1-202ENST00000340882 HAT1O14929 419 aa15.37■□□□□ 0.05
NECTIN1-202ENST00000340882 PJA2O43164 708 aa15.37■□□□□ 0.05
NECTIN1-202ENST00000340882 PDE9AO76083 593 aa15.37■□□□□ 0.05
NECTIN1-202ENST00000340882 ERGP11308 486 aa15.37■□□□□ 0.05
NECTIN1-202ENST00000340882 TFEBP19484 476 aa15.37■□□□□ 0.05
NECTIN1-202ENST00000340882 XCR1P46094 333 aa15.37■□□□□ 0.05
NECTIN1-202ENST00000340882 MEOX1P50221 254 aa15.37■□□□□ 0.05
NECTIN1-202ENST00000340882 EXT1Q16394 746 aa15.37■□□□□ 0.05
NECTIN1-202ENST00000340882 PARP6Q2NL67 630 aa15.37■□□□□ 0.05
NECTIN1-202ENST00000340882 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.37■□□□□ 0.05
NECTIN1-202ENST00000340882 TMEM198Q66K66 360 aa15.37■□□□□ 0.05
NECTIN1-202ENST00000340882 AFTPHQ6ULP2 937 aa15.37■□□□□ 0.05
NECTIN1-202ENST00000340882 HORMAD2Q8N7B1 307 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms