RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 SLC9A5Q14940 896 aa18.32■□□□□ 0.52
SYNE4-202ENST00000340477 TBR1Q16650 682 aa18.32■□□□□ 0.52
SYNE4-202ENST00000340477 UGT8Q16880 541 aa18.32■□□□□ 0.52
SYNE4-202ENST00000340477 DEFB109BQ30KR1 87 aa18.32■□□□□ 0.52
SYNE4-202ENST00000340477 LCN10Q6JVE6 187 aa18.32■□□□□ 0.52
SYNE4-202ENST00000340477 RAB43Q86YS6 212 aa18.32■□□□□ 0.52
SYNE4-202ENST00000340477 PLD3Q8IV08 490 aa18.32■□□□□ 0.52
SYNE4-202ENST00000340477 THAP4Q8WY91 577 aa18.32■□□□□ 0.52
SYNE4-202ENST00000340477 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.32■□□□□ 0.52
SYNE4-202ENST00000340477 FKBP10Q96AY3 582 aa18.32■□□□□ 0.52
SYNE4-202ENST00000340477 RHBDF1Q96CC6 855 aa18.32■□□□□ 0.52
SYNE4-202ENST00000340477 OR2A5Q96R48 311 aa18.32■□□□□ 0.52
SYNE4-202ENST00000340477 RUFY1Q96T51 708 aa18.32■□□□□ 0.52
SYNE4-202ENST00000340477 ALG9Q9H6U8 611 aa18.32■□□□□ 0.52
SYNE4-202ENST00000340477 NUDT4Q9NZJ9 180 aa18.32■□□□□ 0.52
SYNE4-202ENST00000340477 ZNF180Q9UJW8 692 aa18.32■□□□□ 0.52
SYNE4-202ENST00000340477 RALYQ9UKM9 306 aaKnown RBP18.32■□□□□ 0.52
SYNE4-202ENST00000340477 MAN2B2Q9Y2E5 1009 aa18.32■□□□□ 0.52
SYNE4-202ENST00000340477 A0A096LPK6 155 aa18.31■□□□□ 0.52
SYNE4-202ENST00000340477 SYCE1LA8MT33 242 aa18.31■□□□□ 0.52
SYNE4-202ENST00000340477 SUPT3HB4E1H0 165 aa18.31■□□□□ 0.52
SYNE4-202ENST00000340477 RIPK2O43353 540 aa18.31■□□□□ 0.52
SYNE4-202ENST00000340477 KERAO60938 352 aa18.31■□□□□ 0.52
SYNE4-202ENST00000340477 SUPT3HO75486 399 aa18.31■□□□□ 0.52
SYNE4-202ENST00000340477 SLC35G6P0C7Q6 338 aa18.31■□□□□ 0.52
SYNE4-202ENST00000340477 SFTPCP11686 197 aa18.31■□□□□ 0.52
SYNE4-202ENST00000340477 GCGRP47871 477 aa18.31■□□□□ 0.52
SYNE4-202ENST00000340477 OR4D1Q15615 310 aa18.31■□□□□ 0.52
SYNE4-202ENST00000340477 PRTGQ2VWP7 1150 aa18.31■□□□□ 0.52
SYNE4-202ENST00000340477 UBAP2Q5T6F2 1119 aaKnown RBP18.31■□□□□ 0.52
SYNE4-202ENST00000340477 TMPRSS11BQ86T26 416 aa18.31■□□□□ 0.52
SYNE4-202ENST00000340477 METTL27Q8N6F8 245 aaPredicted RBP18.31■□□□□ 0.52
SYNE4-202ENST00000340477 CAMKVQ8NCB2 501 aa18.31■□□□□ 0.52
SYNE4-202ENST00000340477 ABHD11Q8NFV4 315 aa18.31■□□□□ 0.52
SYNE4-202ENST00000340477 APOBEC4Q8WW27 367 aaKnown RBP18.31■□□□□ 0.52
SYNE4-202ENST00000340477 COL26A1Q96A83 441 aa18.31■□□□□ 0.52
SYNE4-202ENST00000340477 MVB12AQ96EY5 273 aa18.31■□□□□ 0.52
SYNE4-202ENST00000340477 AIF1LQ9BQI0 150 aa18.31■□□□□ 0.52
SYNE4-202ENST00000340477 CCDC77Q9BR77 488 aa18.31■□□□□ 0.52
SYNE4-202ENST00000340477 CAPS2Q9BXY5 557 aa18.31■□□□□ 0.52
SYNE4-202ENST00000340477 VPS11Q9H270 941 aa18.31■□□□□ 0.52
SYNE4-202ENST00000340477 PELI2Q9HAT8 420 aa18.31■□□□□ 0.52
SYNE4-202ENST00000340477 ZNF304Q9HCX3 659 aa18.31■□□□□ 0.52
SYNE4-202ENST00000340477 SH2B3Q9UQQ2 575 aa18.31■□□□□ 0.52
SYNE4-202ENST00000340477 RUVBL1Q9Y265 456 aaKnown RBP18.31■□□□□ 0.52
SYNE4-202ENST00000340477 SLC22A14Q9Y267 594 aa18.31■□□□□ 0.52
SYNE4-202ENST00000340477 MGAQ8IWI9 3026 aa18.31■□□□□ 0.52
SYNE4-202ENST00000340477 KCNE1BA0A087WTH5 132 aa18.3■□□□□ 0.52
SYNE4-202ENST00000340477 TK2O00142 265 aa18.3■□□□□ 0.52
SYNE4-202ENST00000340477 ALBP02768 609 aa18.3■□□□□ 0.52
SYNE4-202ENST00000340477 C2P06681 752 aa18.3■□□□□ 0.52
SYNE4-202ENST00000340477 GNAZP19086 355 aa18.3■□□□□ 0.52
SYNE4-202ENST00000340477 FBLP22087 321 aaKnown RBP18.3■□□□□ 0.52
SYNE4-202ENST00000340477 CXCR2P25025 360 aa18.3■□□□□ 0.52
SYNE4-202ENST00000340477 TNFRSF8P28908 595 aa18.3■□□□□ 0.52
SYNE4-202ENST00000340477 HKDC1Q2TB90 917 aa18.3■□□□□ 0.52
SYNE4-202ENST00000340477 ATP1A1-AS1Q5TC04 95 aa18.3■□□□□ 0.52
SYNE4-202ENST00000340477 ASPGQ86U10 573 aa18.3■□□□□ 0.52
SYNE4-202ENST00000340477 GSPT2Q8IYD1 628 aaKnown RBP18.3■□□□□ 0.52
SYNE4-202ENST00000340477 PDPRQ8NCN5 879 aa18.3■□□□□ 0.52
SYNE4-202ENST00000340477 KCTD4Q8WVF5 259 aa18.3■□□□□ 0.52
SYNE4-202ENST00000340477 SLC39A7Q92504 469 aa18.3■□□□□ 0.52
SYNE4-202ENST00000340477 NEIL2Q969S2 332 aa18.3■□□□□ 0.52
SYNE4-202ENST00000340477 PTERQ96BW5 349 aa18.3■□□□□ 0.52
SYNE4-202ENST00000340477 OR4K3Q96R72 315 aa18.3■□□□□ 0.52
SYNE4-202ENST00000340477 DRC3Q9H069 523 aa18.3■□□□□ 0.52
SYNE4-202ENST00000340477 NXT1Q9UKK6 140 aaKnown RBP18.3■□□□□ 0.52
SYNE4-202ENST00000340477 PTRH2Q9Y3E5 179 aaKnown RBP18.3■□□□□ 0.52
SYNE4-202ENST00000340477 TRBC2A0A5B9 178 aa18.29■□□□□ 0.52
SYNE4-202ENST00000340477 FEZF1A0PJY2 475 aa18.29■□□□□ 0.52
SYNE4-202ENST00000340477 OR1F1O43749 312 aa18.29■□□□□ 0.52
SYNE4-202ENST00000340477 H2AFYO75367 372 aaKnown RBP18.29■□□□□ 0.52
SYNE4-202ENST00000340477 KLHL2O95198 593 aa18.29■□□□□ 0.52
SYNE4-202ENST00000340477 SLU7O95391 586 aaKnown RBP18.29■□□□□ 0.52
SYNE4-202ENST00000340477 CAPN1P07384 714 aa18.29■□□□□ 0.52
SYNE4-202ENST00000340477 FAM153BP0C7A2 387 aa18.29■□□□□ 0.52
SYNE4-202ENST00000340477 ITGAXP20702 1163 aa18.29■□□□□ 0.52
SYNE4-202ENST00000340477 AVPR1BP47901 424 aa18.29■□□□□ 0.52
SYNE4-202ENST00000340477 SLC6A12P48065 614 aa18.29■□□□□ 0.52
SYNE4-202ENST00000340477 OCA2Q04671 838 aa18.29■□□□□ 0.52
SYNE4-202ENST00000340477 CDC16Q13042 620 aa18.29■□□□□ 0.52
SYNE4-202ENST00000340477 ACAP2Q15057 778 aa18.29■□□□□ 0.52
SYNE4-202ENST00000340477 FAM153CQ494X1 144 aa18.29■□□□□ 0.52
SYNE4-202ENST00000340477 KLHDC8AQ8IYD2 350 aa18.29■□□□□ 0.52
SYNE4-202ENST00000340477 SNX31Q8N9S9 440 aa18.29■□□□□ 0.52
SYNE4-202ENST00000340477 MFSD9Q8NBP5 474 aa18.29■□□□□ 0.52
SYNE4-202ENST00000340477 RHEBL1Q8TAI7 183 aa18.29■□□□□ 0.52
SYNE4-202ENST00000340477 NXNL1Q96CM4 212 aa18.29■□□□□ 0.52
SYNE4-202ENST00000340477 C10orf90Q96M02 699 aa18.29■□□□□ 0.52
SYNE4-202ENST00000340477 IP6K3Q96PC2 410 aa18.29■□□□□ 0.52
SYNE4-202ENST00000340477 WDR54Q9H977 334 aa18.29■□□□□ 0.52
SYNE4-202ENST00000340477 IGSF5Q9NSI5 407 aa18.29■□□□□ 0.52
SYNE4-202ENST00000340477 DNAJC11Q9NVH1 559 aa18.29■□□□□ 0.52
SYNE4-202ENST00000340477 GPRC5BQ9NZH0 403 aa18.29■□□□□ 0.52
SYNE4-202ENST00000340477 HMX2A2RU54 273 aa18.28■□□□□ 0.52
SYNE4-202ENST00000340477 TRIM49D1C9J1S8 452 aa18.28■□□□□ 0.52
SYNE4-202ENST00000340477 CLGNO14967 610 aa18.28■□□□□ 0.52
SYNE4-202ENST00000340477 STK16O75716 305 aa18.28■□□□□ 0.52
SYNE4-202ENST00000340477 ALDOAP04075 364 aaKnown RBP18.28■□□□□ 0.52
SYNE4-202ENST00000340477 SNRPAP09012 282 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms