RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 GBX1Q14549 363 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 RAB39AQ14964 217 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 PLEKHS1Q5SXH7 462 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 R3HCC1LQ7Z5L2 792 aaKnown RBP8.54□□□□□ -1.04
SNCA-201ENST00000336904 GPR141Q7Z602 305 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 ZDHHC21Q8IVQ6 265 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 FGF13Q92913 245 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 SDCCAG3Q96C92 435 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 NUS1Q96E22 293 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 KXD1Q9BQD3 176 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 RPP25Q9BUL9 199 aaKnown RBP8.54□□□□□ -1.04
SNCA-201ENST00000336904 TMEM106CQ9BVX2 250 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 NPLQ9BXD5 320 aaPredicted RBP8.54□□□□□ -1.04
SNCA-201ENST00000336904 SLC29A3Q9BZD2 475 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 OSBPL6Q9BZF3 934 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 XKR8Q9H6D3 395 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 FZD3Q9NPG1 666 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 AASDHPPTQ9NRN7 309 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 PLEKHM1Q9Y4G2 1056 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 PCDH7O60245 1069 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 TRMUO75648 421 aaKnown RBP8.54□□□□□ -1.04
SNCA-201ENST00000336904 ETFAP13804 333 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 SOAT1P35610 550 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 ALDH3A2P51648 485 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 FGD3Q5JSP0 725 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 C9orf64Q5T6V5 341 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 C1orf53Q5VUE5 145 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 TANGO2Q6ICL3 276 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 SZRD1Q7Z422 152 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 METTL3Q86U44 580 aaKnown RBP8.54□□□□□ -1.04
SNCA-201ENST00000336904 L3MBTL4Q8NA19 623 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 SMYD1Q8NB12 490 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 WDR20Q8TBZ3 569 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 NELL1Q92832 810 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 C12orf43Q96C57 262 aaKnown RBP8.54□□□□□ -1.04
SNCA-201ENST00000336904 ISOC1Q96CN7 298 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 CMTM7Q96FZ5 175 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 KCNH6Q9H252 994 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 AMBNQ9NP70 447 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 TBC1D14Q9P2M4 693 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 DEC1Q9P2X7 70 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 SPASTQ9UBP0 616 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 MAP4K5Q9Y4K4 846 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 SNX8Q9Y5X2 465 aa8.54□□□□□ -1.04
SNCA-201ENST00000336904 SCN2AQ99250 2005 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 MGAT4DA6NG13 374 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 IGLON5A6NGN9 336 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 MAGEB3O15480 346 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 PSIP1O75475 530 aaKnown RBP8.53□□□□□ -1.04
SNCA-201ENST00000336904 C1orf105O95561 183 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 KLK1P06870 262 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 TFPTP0C1Z6 253 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 ALPPL2P10696 532 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 ADRB3P13945 408 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 POU2F1P14859 743 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 ZNF30P17039 623 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 MATN1P21941 496 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 DCTP40126 519 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 ALDH9A1P49189 494 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 ADARB1P78563 741 aaKnown RBP8.53□□□□□ -1.04
SNCA-201ENST00000336904 IL5RAQ01344 420 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 ILF2Q12905 390 aaKnown RBP8.53□□□□□ -1.04
SNCA-201ENST00000336904 EGFLAMQ63HQ2 1017 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 DPPA4Q7L190 304 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 ARMCX6Q7L4S7 300 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 PATL1Q86TB9 770 aaKnown RBP8.53□□□□□ -1.04
SNCA-201ENST00000336904 NPAS3Q8IXF0 933 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 NAGSQ8N159 534 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 PAPD5Q8NDF8 572 aaKnown RBP8.53□□□□□ -1.04
SNCA-201ENST00000336904 DTD2Q96FN9 168 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 HSH2DQ96JZ2 352 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 DUSP26Q9BV47 211 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 UGT2B28Q9BY64 529 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 CXorf21Q9HAI6 301 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 DCAF13Q9NV06 445 aaKnown RBP8.53□□□□□ -1.04
SNCA-201ENST00000336904 CUEDC1Q9NWM3 386 aaPredicted RBP8.53□□□□□ -1.04
SNCA-201ENST00000336904 FZD4Q9ULV1 537 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 KLHL20Q9Y2M5 609 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 SNX11Q9Y5W9 270 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 CKAP5Q14008 2032 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 A0A096LPI6 279 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 SLC5A10A0PJK1 596 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 PRKRAO75569 313 aaKnown RBP8.53□□□□□ -1.04
SNCA-201ENST00000336904 EPN2O95208 641 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 C6orf47O95873 294 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 HOXB3P14651 431 aaPredicted RBP8.53□□□□□ -1.04
SNCA-201ENST00000336904 NPPBP16860 134 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 PRLHRP49683 370 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 HNMTP50135 292 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 GZMMP51124 257 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 GALK1P51570 392 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 EPHA5P54756 1037 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 RAPSNQ13702 412 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 XKR5Q6UX68 686 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.53□□□□□ -1.04
SNCA-201ENST00000336904 CCDC81Q6ZN84 652 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 CYP4Z1Q86W10 505 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 PTOV1Q86YD1 416 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 OR4A15Q8NGL6 344 aa8.53□□□□□ -1.04
SNCA-201ENST00000336904 NCSTNQ92542 709 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms