RNA–Protein interactions for RNA: ENST00000336233.9

LIPA-202, Transcript of lipase A, lysosomal acid type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPA, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-202ENST00000336233 SPHK2Q9NRA0 654 aa13.78□□□□□ -0.2
LIPA-202ENST00000336233 TMEM39AQ9NV64 488 aa13.78□□□□□ -0.2
LIPA-202ENST00000336233 MARK1Q9P0L2 795 aa13.78□□□□□ -0.2
LIPA-202ENST00000336233 ITM2BQ9Y287 266 aa13.78□□□□□ -0.2
LIPA-202ENST00000336233 PCDHB11Q9Y5F2 797 aa13.78□□□□□ -0.2
LIPA-202ENST00000336233 KRT87PA6NCN2 255 aa13.77□□□□□ -0.2
LIPA-202ENST00000336233 E9PQ18 207 aa13.77□□□□□ -0.2
LIPA-202ENST00000336233 MYO1DO94832 1006 aa13.77□□□□□ -0.2
LIPA-202ENST00000336233 ZNF682O95780 498 aa13.77□□□□□ -0.2
LIPA-202ENST00000336233 FABP3P05413 133 aa13.77□□□□□ -0.2
LIPA-202ENST00000336233 ABCB1P08183 1280 aaPredicted RBP13.77□□□□□ -0.2
LIPA-202ENST00000336233 TYRP14679 529 aa13.77□□□□□ -0.2
LIPA-202ENST00000336233 JUNDP17535 347 aa13.77□□□□□ -0.2
LIPA-202ENST00000336233 AGXTP21549 392 aa13.77□□□□□ -0.2
LIPA-202ENST00000336233 PPIBP23284 216 aaKnown RBP13.77□□□□□ -0.2
LIPA-202ENST00000336233 ETV3P41162 512 aa13.77□□□□□ -0.2
LIPA-202ENST00000336233 RAB15P59190 212 aa13.77□□□□□ -0.2
LIPA-202ENST00000336233 CXCR4P61073 352 aa13.77□□□□□ -0.2
LIPA-202ENST00000336233 Q6ZNX1 250 aa13.77□□□□□ -0.2
LIPA-202ENST00000336233 RAVER1Q8IY67 606 aaKnown RBP13.77□□□□□ -0.2
LIPA-202ENST00000336233 RNF175Q8N4F7 328 aa13.77□□□□□ -0.2
LIPA-202ENST00000336233 NODALQ96S42 347 aa13.77□□□□□ -0.2
LIPA-202ENST00000336233 TBCCD1Q9NVR7 557 aa13.77□□□□□ -0.2
LIPA-202ENST00000336233 PAK1IP1Q9NWT1 392 aaPredicted RBP13.77□□□□□ -0.2
LIPA-202ENST00000336233 CORO2BQ9UQ03 480 aa13.77□□□□□ -0.2
LIPA-202ENST00000336233 SNX5Q9Y5X3 404 aa13.77□□□□□ -0.2
LIPA-202ENST00000336233 CCL16O15467 120 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 MOSPD3O75425 235 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 LEFTY1O75610 366 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 CATP04040 527 aaKnown RBP13.77□□□□□ -0.21
LIPA-202ENST00000336233 HNRNPCP07910 306 aaKnown RBP eCLIP13.77□□□□□ -0.21
LIPA-202ENST00000336233 ITGA1P56199 1179 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 RAE1P78406 368 aaKnown RBP13.77□□□□□ -0.21
LIPA-202ENST00000336233 PHEXP78562 749 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 ACSM2AQ08AH3 577 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 LRRC74AQ0VAA2 488 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 PPP1R8Q12972 351 aaKnown RBP13.77□□□□□ -0.21
LIPA-202ENST00000336233 C16orf72Q14CZ0 275 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 ACOX1Q15067 660 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 SYTL3Q4VX76 610 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 ACSM2BQ68CK6 577 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 TMEM215Q68D42 235 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 CEP68Q76N32 757 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 FBXO15Q8NCQ5 510 aaPredicted RBP13.77□□□□□ -0.21
LIPA-202ENST00000336233 LRIG1Q96JA1 1093 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 OR4K3Q96R72 315 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 YME1L1Q96TA2 773 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 TRPV5Q9NQA5 729 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 ENPP5Q9UJA9 477 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 ERVK-11Q9UQG0 969 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 C1orf226A1L170 272 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 TMEM202A6NGA9 273 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 NPC1O15118 1278 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 MRPS14O60783 128 aaKnown RBP13.77□□□□□ -0.21
LIPA-202ENST00000336233 ATG13O75143 517 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 JRKO75564 520 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 HOXD11P31277 338 aaPredicted RBP13.77□□□□□ -0.21
LIPA-202ENST00000336233 HOXD12P35452 270 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 DAPP51397 102 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 ARHGDIAP52565 204 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 RAPSNQ13702 412 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 ZNF77Q15935 545 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 ZNF284Q2VY69 593 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 ZNF658BQ4V348 819 aaPredicted RBP13.77□□□□□ -0.21
LIPA-202ENST00000336233 SLC16A12Q6ZSM3 486 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 RASGEF1AQ8N9B8 481 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 BPIFB6Q8NFQ5 453 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 CHTF18Q8WVB6 975 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 GLYATL1Q969I3 302 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 COQ8BQ96D53 544 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 CXorf40BQ96DE9 158 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 CSF3RQ99062 836 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 CCM2Q9BSQ5 444 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 RNF208Q9H0X6 261 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 SIRT5Q9NXA8 310 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 TBC1D14Q9P2M4 693 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 FBXO10Q9UK96 956 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 U3KQV3 271 aa13.77□□□□□ -0.21
LIPA-202ENST00000336233 YY2O15391 372 aa13.76□□□□□ -0.21
LIPA-202ENST00000336233 TSPAN6O43657 245 aa13.76□□□□□ -0.21
LIPA-202ENST00000336233 CXCL14O95715 111 aa13.76□□□□□ -0.21
LIPA-202ENST00000336233 BCL10O95999 233 aa13.76□□□□□ -0.21
LIPA-202ENST00000336233 CLTBP09497 229 aa13.76□□□□□ -0.21
LIPA-202ENST00000336233 POLR2EP19388 210 aaKnown RBP13.76□□□□□ -0.21
LIPA-202ENST00000336233 SPIN4Q56A73 249 aa13.76□□□□□ -0.21
LIPA-202ENST00000336233 ANXA8L1Q5VT79 327 aa13.76□□□□□ -0.21
LIPA-202ENST00000336233 ANKRD13BQ86YJ7 626 aa13.76□□□□□ -0.21
LIPA-202ENST00000336233 ZC3H7AQ8IWR0 971 aaKnown RBP13.76□□□□□ -0.21
LIPA-202ENST00000336233 NRSN1Q8IZ57 195 aa13.76□□□□□ -0.21
LIPA-202ENST00000336233 TMEM159Q96B96 161 aa13.76□□□□□ -0.21
LIPA-202ENST00000336233 HSPBAP1Q96EW2 488 aa13.76□□□□□ -0.21
LIPA-202ENST00000336233 HSH2DQ96JZ2 352 aa13.76□□□□□ -0.21
LIPA-202ENST00000336233 DUSP26Q9BV47 211 aa13.76□□□□□ -0.21
LIPA-202ENST00000336233 GPBP1L1Q9HC44 474 aaPredicted RBP13.76□□□□□ -0.21
LIPA-202ENST00000336233 TBC1D23Q9NUY8 699 aa13.76□□□□□ -0.21
LIPA-202ENST00000336233 HCFC1R1Q9NWW0 138 aa13.76□□□□□ -0.21
LIPA-202ENST00000336233 MYOFQ9NZM1 2061 aa13.76□□□□□ -0.21
LIPA-202ENST00000336233 TRIM43BA6NCK2 446 aa13.76□□□□□ -0.21
LIPA-202ENST00000336233 OR2AG2A6NM03 316 aa13.76□□□□□ -0.21
LIPA-202ENST00000336233 MITFO75030 526 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms