RNA–Protein interactions for RNA: ENST00000331789.9

ACTB-201, Transcript of actin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTB, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-201ENST00000331789 PRR19A6NJB7 356 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 C7P10643 843 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 PCSK2P16519 638 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 OXTRP30559 389 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 HSD17B2P37059 387 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 FXNQ16595 210 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 SPIN4Q56A73 249 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 GLYATQ6IB77 296 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 ANO7Q6IWH7 933 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 FAM129CQ86XR2 697 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 ADGRG5Q8IZF4 528 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 ADCY4Q8NFM4 1077 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 OR10A6Q8NH74 314 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 SCARF2Q96GP6 870 aaPredicted RBP17.21■□□□□ 0.35
ACTB-201ENST00000331789 CAMK1GQ96NX5 476 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 XKR8Q9H6D3 395 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 RPF2Q9H7B2 306 aaKnown RBP17.21■□□□□ 0.35
ACTB-201ENST00000331789 PRDM8Q9NQV8 689 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 ARMC1Q9NVT9 282 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 CUEDC1Q9NWM3 386 aaPredicted RBP17.21■□□□□ 0.35
ACTB-201ENST00000331789 SPATA7Q9P0W8 599 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 NDRG2Q9UN36 371 aaKnown RBP17.21■□□□□ 0.35
ACTB-201ENST00000331789 PRMT3O60678 531 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 ERN1O75460 977 aaKnown RBP17.21■□□□□ 0.35
ACTB-201ENST00000331789 CAPNS1P04632 268 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 COX7A2P14406 83 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 IDSP22304 550 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 KIR3DL1P43629 444 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 WNT3P56703 355 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 MTAPQ13126 283 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 SMAD4Q13485 552 aaKnown RBP17.21■□□□□ 0.35
ACTB-201ENST00000331789 RBBP5Q15291 538 aaKnown RBP17.21■□□□□ 0.35
ACTB-201ENST00000331789 CYP51A1Q16850 503 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 HKDC1Q2TB90 917 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 TBCELQ5QJ74 424 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 TPRG1LQ5T0D9 272 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 LRIF1Q5T3J3 769 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 ENPP7Q6UWV6 458 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 VN1R5Q7Z5H4 357 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 C17orf64Q86WR6 236 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 PROSER1Q86XN7 944 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 TICAM1Q8IUC6 712 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 PHACTR4Q8IZ21 702 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 LINC01555Q8NAE3 123 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 WDR48Q8TAF3 677 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 HMGB4Q8WW32 186 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 SMPDL3AQ92484 453 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 MIEF2Q96C03 454 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 BIRC7Q96CA5 298 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 AURKBQ96GD4 344 aaPredicted RBP17.21■□□□□ 0.35
ACTB-201ENST00000331789 EFHD1Q9BUP0 239 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 REXO4Q9GZR2 422 aaKnown RBP17.21■□□□□ 0.35
ACTB-201ENST00000331789 CARS2Q9HA77 564 aaKnown RBP17.21■□□□□ 0.35
ACTB-201ENST00000331789 BTBD3Q9Y2F9 522 aa17.21■□□□□ 0.35
ACTB-201ENST00000331789 TNRC18O15417 2968 aaPredicted RBP17.2■□□□□ 0.34
ACTB-201ENST00000331789 PRAMEF33A0A0G2JMD5 474 aa17.2■□□□□ 0.34
ACTB-201ENST00000331789 PRSS38A1L453 326 aa17.2■□□□□ 0.34
ACTB-201ENST00000331789 OR52A4PA6NMU1 304 aa17.2■□□□□ 0.34
ACTB-201ENST00000331789 YY2O15391 372 aa17.2■□□□□ 0.34
ACTB-201ENST00000331789 PCDH7O60245 1069 aa17.2■□□□□ 0.34
ACTB-201ENST00000331789 HOXB9P17482 250 aaPredicted RBP17.2■□□□□ 0.34
ACTB-201ENST00000331789 PTPN6P29350 595 aa17.2■□□□□ 0.34
ACTB-201ENST00000331789 TIA1P31483 386 aaKnown RBP eCLIP17.2■□□□□ 0.344e-28■■■□□ 16.6
ACTB-201ENST00000331789 SRSF11Q05519 484 aaKnown RBP17.2■□□□□ 0.34
ACTB-201ENST00000331789 TCEA2Q15560 299 aa17.2■□□□□ 0.34
ACTB-201ENST00000331789 FBXO43Q4G163 708 aa17.2■□□□□ 0.34
ACTB-201ENST00000331789 AASDHQ4L235 1098 aaPredicted RBP17.2■□□□□ 0.34
ACTB-201ENST00000331789 TMIGD1Q6UXZ0 262 aa17.2■□□□□ 0.34
ACTB-201ENST00000331789 ARMCX6Q7L4S7 300 aa17.2■□□□□ 0.34
ACTB-201ENST00000331789 DTWD1Q8N5C7 304 aa17.2■□□□□ 0.34
ACTB-201ENST00000331789 OR1E3Q8WZA6 343 aa17.2■□□□□ 0.34
ACTB-201ENST00000331789 PPWD1Q96BP3 646 aaKnown RBP17.2■□□□□ 0.34
ACTB-201ENST00000331789 BMFQ96LC9 184 aa17.2■□□□□ 0.34
ACTB-201ENST00000331789 CPPED1Q9BRF8 314 aaPredicted RBP17.2■□□□□ 0.34
ACTB-201ENST00000331789 SCHIP1Q9P0W5 487 aaPredicted RBP17.2■□□□□ 0.34
ACTB-201ENST00000331789 EBF1Q9UH73 591 aa17.2■□□□□ 0.34
ACTB-201ENST00000331789 AK5Q9Y6K8 562 aa17.2■□□□□ 0.34
ACTB-201ENST00000331789 GNG14A0A1W2PPG7 69 aa17.19■□□□□ 0.34
ACTB-201ENST00000331789 PDZK1P1A8MUH7 402 aa17.19■□□□□ 0.34
ACTB-201ENST00000331789 FPGTO14772 594 aa17.19■□□□□ 0.34
ACTB-201ENST00000331789 KCNJ13O60928 360 aa17.19■□□□□ 0.34
ACTB-201ENST00000331789 SCN2BO60939 215 aa17.19■□□□□ 0.34
ACTB-201ENST00000331789 GBAP04062 536 aa17.19■□□□□ 0.34
ACTB-201ENST00000331789 LAMP1P11279 417 aa17.19■□□□□ 0.34
ACTB-201ENST00000331789 GLULP15104 373 aa17.19■□□□□ 0.34
ACTB-201ENST00000331789 PSMA4P25789 261 aaKnown RBP17.19■□□□□ 0.34
ACTB-201ENST00000331789 KIAA1024LP59773 190 aa17.19■□□□□ 0.34
ACTB-201ENST00000331789 SFSWAPQ12872 951 aaKnown RBP17.19■□□□□ 0.34
ACTB-201ENST00000331789 IRAK1BP1Q5VVH5 260 aa17.19■□□□□ 0.34
ACTB-201ENST00000331789 COMMD6Q7Z4G1 85 aa17.19■□□□□ 0.34
ACTB-201ENST00000331789 TRIM69Q86WT6 500 aa17.19■□□□□ 0.34
ACTB-201ENST00000331789 KRT78Q8N1N4 520 aa17.19■□□□□ 0.34
ACTB-201ENST00000331789 TMEM132CQ8N3T6 1108 aa17.19■□□□□ 0.34
ACTB-201ENST00000331789 GOLM1Q8NBJ4 401 aa17.19■□□□□ 0.34
ACTB-201ENST00000331789 ICA1LQ8NDH6 482 aa17.19■□□□□ 0.34
ACTB-201ENST00000331789 DNAJB8Q8NHS0 232 aa17.19■□□□□ 0.34
ACTB-201ENST00000331789 UBE2E3Q969T4 207 aa17.19■□□□□ 0.34
ACTB-201ENST00000331789 TBCDQ9BTW9 1192 aa17.19■□□□□ 0.34
ACTB-201ENST00000331789 PHF7Q9BWX1 381 aaPredicted RBP17.19■□□□□ 0.34
ACTB-201ENST00000331789 UBE2ZQ9H832 354 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms