RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 CORO1CQ9ULV4 474 aaPredicted RBP12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 NOVA2Q9UNW9 492 aaKnown RBP12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 COPG1Q9Y678 874 aaKnown RBP12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 DIDO1Q9BTC0 2240 aaKnown RBP12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 UTP20O75691 2785 aaKnown RBP12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 IGHV1-45A0A0A0MS14 117 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 WIPF3A6NGB9 483 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 IDSB3KWA1 339 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 P2RX6O15547 441 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 SEMA7AO75326 666 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 ALOX12BO75342 701 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 NSA2O95478 260 aaKnown RBP12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 ANXA5P08758 320 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 CXCR2P25025 360 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 GABRB3P28472 473 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 SOX11P35716 441 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 EMP2P54851 167 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 TBPL1P62380 186 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 AP2B1P63010 937 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 MFAP5Q13361 173 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 MRPL49Q13405 166 aaKnown RBP12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 TSTA3Q13630 321 aaPredicted RBP12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 FRG1Q14331 258 aaKnown RBP12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 MORF4L2Q15014 288 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 TLR1Q15399 786 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 THEMIS2Q5TEJ8 643 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 TMEM205Q6UW68 189 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 LCTLQ6UWM7 567 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 RIPOR1Q6ZS17 1223 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 LAPTM4BQ86VI4 370 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 PARP9Q8IXQ6 854 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 KBTBD2Q8IY47 623 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 LRRC39Q96DD0 335 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 MMABQ96EY8 250 aaPredicted RBP12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 CERS2Q96G23 380 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 SARGQ9BW04 601 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 DDX47Q9H0S4 455 aaKnown RBP12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 RIC8BQ9NVN3 520 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 TRPC4Q9UBN4 977 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 ASIC3Q9UHC3 531 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 PDE10AQ9Y233 779 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 UNC79Q9P2D8 2635 aa12.89□□□□□ -0.35
GTF3C6-201ENST00000329970 NSG1A0A0A6YYJ2 146 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 H7BY64 318 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 AHSGP02765 367 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 SERPINA7P05543 415 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 AVPR1BP47901 424 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 GLRBP48167 497 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 AP1S2P56377 157 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 CSNK1G2P78368 415 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 CBLBQ13191 982 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 ZNF169Q14929 603 aaPredicted RBP12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 NR6A1Q15406 480 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 HIF1AQ16665 826 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 MSS51Q4VC12 460 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 TEDDM1Q5T9Z0 273 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 STEAP4Q687X5 459 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 PAQR3Q6TCH7 311 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 VN1R4Q7Z5H5 301 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 ADCK2Q7Z695 626 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 PALM2Q8IXS6 379 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 MYO1HQ8N1T3 1032 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 ST6GALNAC3Q8NDV1 305 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 DNAJB14Q8TBM8 379 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 EEF1AKMT1Q8WVE0 214 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 PSMF1Q92530 271 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 TM4SF19Q96DZ7 209 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 PRAP1Q96NZ9 151 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 SGPP1Q9BX95 441 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 KCNF1Q9H3M0 494 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 GRPEL1Q9HAV7 217 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 ZNF160Q9HCG1 818 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 MAP10Q9P2G4 905 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 ADAMTS6Q9UKP5 1117 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 NTNG1Q9Y2I2 539 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 MRPS2Q9Y399 296 aaKnown RBP12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 CSAG2Q9Y5P2 127 aa12.88□□□□□ -0.35
GTF3C6-201ENST00000329970 A0A0A6YYC8 382 aaPredicted RBP12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 ANKUB1A6NFN9 424 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 I3L1I5 382 aaPredicted RBP12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 BMP10O95393 424 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 TSPAN12O95859 305 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 HEXBP07686 556 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 HIST1H2AGP0C0S8 130 aaPredicted RBP12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 PRR35P0CG20 571 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 ICAM2P13598 275 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 HIST1H2ADP20671 130 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 CDKN2DP55273 166 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 INAQ16352 499 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 EIF2S3LQ2VIR3 472 aaKnown RBP12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 RBM20Q5T481 1227 aaKnown RBP12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 FAM45BPQ6NSW5 357 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 TMEM214Q6NUQ4 689 aaKnown RBP12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 AGTRAPQ6RW13 159 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 C17orf64Q86WR6 236 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 ZC3H7AQ8IWR0 971 aaKnown RBP12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 PRSS58Q8IYP2 241 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 PDIK1LQ8N165 341 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 CAMKVQ8NCB2 501 aa12.87□□□□□ -0.35
GTF3C6-201ENST00000329970 ABHD11Q8NFV4 315 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms