RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 C16orf72Q14CZ0 275 aa15.85■□□□□ 0.13
PDLIM1-201ENST00000329399 GSTA3Q16772 222 aa15.85■□□□□ 0.13
PDLIM1-201ENST00000329399 GGTA1PQ4G0N0 100 aa15.85■□□□□ 0.13
PDLIM1-201ENST00000329399 DNAL1Q4LDG9 190 aa15.85■□□□□ 0.13
PDLIM1-201ENST00000329399 SYVN1Q86TM6 617 aa15.85■□□□□ 0.13
PDLIM1-201ENST00000329399 SLC9B2Q86UD5 537 aa15.85■□□□□ 0.13
PDLIM1-201ENST00000329399 VRK3Q8IV63 474 aa15.85■□□□□ 0.13
PDLIM1-201ENST00000329399 RP9Q8TA86 221 aaKnown RBP15.85■□□□□ 0.13
PDLIM1-201ENST00000329399 TMEM79Q9BSE2 394 aa15.85■□□□□ 0.13
PDLIM1-201ENST00000329399 ZNF385DQ9H6B1 395 aa15.85■□□□□ 0.13
PDLIM1-201ENST00000329399 WDR55Q9H6Y2 383 aaPredicted RBP15.85■□□□□ 0.13
PDLIM1-201ENST00000329399 ARL8BQ9NVJ2 186 aa15.85■□□□□ 0.13
PDLIM1-201ENST00000329399 NDE1Q9NXR1 346 aa15.85■□□□□ 0.13
PDLIM1-201ENST00000329399 LRRC14BA6NHZ5 514 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 ZNF839A8K0R7 811 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 E9PBE3 544 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 MYO1CO00159 1063 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 KLHL41O60662 606 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 NQO1P15559 274 aaKnown RBP15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 TYRP1P17643 537 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 LBPP18428 481 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 CCND1P24385 295 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 ETV5P41161 510 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 LSSP48449 732 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 KLF10Q13118 480 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 SQSTM1Q13501 440 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 GPR18Q14330 331 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 SQLEQ14534 574 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 C10orf62Q5T681 223 aaPredicted RBP15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 TMEM26Q6ZUK4 368 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 WDR48Q8TAF3 677 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 METTL6Q8TCB7 284 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 SLC7A6OSQ96CW6 309 aaPredicted RBP15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 RASSF4Q9H2L5 321 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 POLR1BQ9H9Y6 1135 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 ASCL3Q9NQ33 180 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 ACSS2Q9NR19 701 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 DNAJC11Q9NVH1 559 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 GPRC5BQ9NZH0 403 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 DKK4Q9UBT3 224 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 SMG1Q96Q15 3661 aaKnown RBP15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 SERTM1A2A2V5 107 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 OR5K4A6NMS3 321 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 TMEM233B4DJY2 109 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 OR7A17O14581 309 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 SKAP2O75563 359 aaPredicted RBP15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 CLDN9O95484 217 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 CBX6O95503 412 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 VIPP01282 170 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 KRT6AP02538 564 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 KRT6BP04259 564 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 ITIH1P19827 911 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 HMOX2P30519 316 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 CCKBRP32239 447 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 PREPP48147 710 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 KRT6CP48668 564 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 STX1BP61266 288 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 ABRQ12979 859 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 SPRED3Q2MJR0 410 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 PHF19Q5T6S3 580 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 LIPJQ5W064 366 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 CLEC6AQ6EIG7 209 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 CAPRIN2Q6IMN6 1127 aaKnown RBP15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 RPS27LQ71UM5 84 aaKnown RBP15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 NCSTNQ92542 709 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 NXPE2Q96DL1 559 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 SLC46A1Q96NT5 459 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 ARMCX1Q9P291 453 aa15.84■□□□□ 0.13
PDLIM1-201ENST00000329399 PTPRQQ9UMZ3 2332 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 ARHGEF33A8MVX0 844 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 SLC28A1O00337 649 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 IFRD1O00458 451 aaPredicted RBP15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 GYG2O15488 501 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 C1orf105O95561 183 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 CCL4P13236 92 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 TSPAN8P19075 237 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 ACADLP28330 430 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 PNLIPRP1P54315 467 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 ERVPABLB-1P60509 514 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 PPP1CAP62136 330 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 TRAF3Q13114 568 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 MAD2L1Q13257 205 aaPredicted RBP15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 ARHGAP19Q14CB8 494 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 NAA25Q14CX7 972 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 XKR7Q5GH72 579 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 RAB11FIP2Q7L804 512 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 PDZD3Q86UT5 571 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 TREML1Q86YW5 311 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 DDIASQ8IXT1 998 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 L3MBTL4Q8NA19 623 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 OR4F6Q8NGB9 312 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 OR56A3Q8NH54 315 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 TSPEARQ8WU66 669 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 PMEPA1Q969W9 287 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 RAD51AP1Q96B01 352 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 LIN37Q96GY3 246 aaPredicted RBP15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 CCDC74BQ96LY2 380 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 OR52A5Q9H2C5 316 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 TNFRSF12AQ9NP84 129 aa15.83■□□□□ 0.12
PDLIM1-201ENST00000329399 SNX6Q9UNH7 406 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms