RNA–Protein interactions for RNA: ENST00000328354.10

CHEK2-201, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHEK2, Length 1,867 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-201ENST00000328354 TRIP10Q15642 601 aa13.71□□□□□ -0.21
CHEK2-201ENST00000328354 MSRB3Q8IXL7 192 aa13.71□□□□□ -0.21
CHEK2-201ENST00000328354 LILRA2Q8N149 483 aa13.71□□□□□ -0.21
CHEK2-201ENST00000328354 KRT78Q8N1N4 520 aa13.71□□□□□ -0.21
CHEK2-201ENST00000328354 RAB42Q8N4Z0 105 aa13.71□□□□□ -0.21
CHEK2-201ENST00000328354 C1orf52Q8N6N3 182 aaKnown RBP13.71□□□□□ -0.21
CHEK2-201ENST00000328354 ITCHQ96J02 903 aa13.71□□□□□ -0.21
CHEK2-201ENST00000328354 CAMK1GQ96NX5 476 aa13.71□□□□□ -0.21
CHEK2-201ENST00000328354 FERD3LQ96RJ6 166 aa13.71□□□□□ -0.21
CHEK2-201ENST00000328354 RAB11FIP5Q9BXF6 653 aa13.71□□□□□ -0.21
CHEK2-201ENST00000328354 PITHD1Q9GZP4 211 aaPredicted RBP13.71□□□□□ -0.21
CHEK2-201ENST00000328354 PAIP1Q9H074 479 aaKnown RBP13.71□□□□□ -0.21
CHEK2-201ENST00000328354 SLC25A37Q9NYZ2 338 aa13.71□□□□□ -0.21
CHEK2-201ENST00000328354 EBF1Q9UH73 591 aa13.71□□□□□ -0.21
CHEK2-201ENST00000328354 TAC3Q9UHF0 121 aa13.71□□□□□ -0.21
CHEK2-201ENST00000328354 EGFL7Q9UHF1 273 aa13.71□□□□□ -0.21
CHEK2-201ENST00000328354 PCDHB3Q9Y5E6 796 aa13.71□□□□□ -0.21
CHEK2-201ENST00000328354 TOR1BO14657 336 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 TNFRSF10CO14798 259 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 PEX2P28328 305 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 PKLRP30613 574 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 TIA1P31483 386 aaKnown RBP eCLIP13.7□□□□□ -0.22
CHEK2-201ENST00000328354 KIR3DL1P43629 444 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 RAB28P51157 221 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 SELPLGQ14242 412 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 UGT8Q16880 541 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 AASDHQ4L235 1098 aaPredicted RBP13.7□□□□□ -0.22
CHEK2-201ENST00000328354 RUNDC3AQ59EK9 446 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 LPCAT4Q643R3 524 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 IZUMO2Q6UXV1 221 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 TMIGD1Q6UXZ0 262 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 WASH2PQ6VEQ5 465 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 GCNT7Q6ZNI0 430 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 CAMKMTQ7Z624 323 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 GPR180Q86V85 440 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 ZNF687Q8N1G0 1237 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 TMEM102Q8N9M5 508 aaPredicted RBP13.7□□□□□ -0.22
CHEK2-201ENST00000328354 LINC01555Q8NAE3 123 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 OR8J2Q8NGG1 315 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 OR1E3Q8WZA6 343 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 WDR92Q96MX6 357 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 SH3GL1Q99961 368 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 ECSITQ9BQ95 431 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 KLHL4Q9C0H6 718 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 RHBGQ9H310 441 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 NT5DC2Q9H857 520 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 COPS7BQ9H9Q2 264 aaPredicted RBP13.7□□□□□ -0.22
CHEK2-201ENST00000328354 CARS2Q9HA77 564 aaKnown RBP13.7□□□□□ -0.22
CHEK2-201ENST00000328354 POLMQ9NP87 494 aaPredicted RBP13.7□□□□□ -0.22
CHEK2-201ENST00000328354 ARMC1Q9NVT9 282 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 ADGRE2Q9UHX3 823 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 MOSPD1Q9UJG1 213 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 SNRNP200O75643 2136 aaKnown RBP13.7□□□□□ -0.22
CHEK2-201ENST00000328354 CHURC1-FNTBB4DL54 471 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 SEMA4FO95754 770 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 CHRNB1P11230 501 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 PTPN6P29350 595 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 DGKEP52429 567 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 MTPNP58546 118 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 YPEL5P62699 121 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 Q6ZS52 159 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 VN1R5Q7Z5H4 357 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 PROSER1Q86XN7 944 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 C2orf73Q8N5S3 287 aaPredicted RBP13.7□□□□□ -0.22
CHEK2-201ENST00000328354 TMEM145Q8NBT3 493 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 ZNF740Q8NDX6 193 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 OR4K1Q8NGD4 311 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 OR2L8Q8NGY9 312 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 HMGB4Q8WW32 186 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 PDXPQ96GD0 296 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 ZNF583Q96ND8 569 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 NRTNQ99748 197 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 PKP2Q99959 881 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 EFHD1Q9BUP0 239 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 CCM2LQ9NUG4 571 aaPredicted RBP13.7□□□□□ -0.22
CHEK2-201ENST00000328354 IMP3Q9NV31 184 aaKnown RBP13.7□□□□□ -0.22
CHEK2-201ENST00000328354 NDRG2Q9UN36 371 aaKnown RBP13.7□□□□□ -0.22
CHEK2-201ENST00000328354 HEBP2Q9Y5Z4 205 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 HS3ST3A1Q9Y663 406 aa13.7□□□□□ -0.22
CHEK2-201ENST00000328354 ARHGEF17Q96PE2 2063 aaPredicted RBP13.69□□□□□ -0.22
CHEK2-201ENST00000328354 FANCMQ8IYD8 2048 aa13.69□□□□□ -0.22
CHEK2-201ENST00000328354 TCRBV5S2A0A599 114 aa13.69□□□□□ -0.22
CHEK2-201ENST00000328354 H0Y8X5 98 aa13.69□□□□□ -0.22
CHEK2-201ENST00000328354 SCN2BO60939 215 aa13.69□□□□□ -0.22
CHEK2-201ENST00000328354 LRATO95237 230 aa13.69□□□□□ -0.22
CHEK2-201ENST00000328354 ANXA4P09525 319 aaPredicted RBP13.69□□□□□ -0.22
CHEK2-201ENST00000328354 MTHFD1P11586 935 aaKnown RBP13.69□□□□□ -0.22
CHEK2-201ENST00000328354 CXCR2P25025 360 aa13.69□□□□□ -0.22
CHEK2-201ENST00000328354 HTR1BP28222 390 aa13.69□□□□□ -0.22
CHEK2-201ENST00000328354 AKT2P31751 481 aa13.69□□□□□ -0.22
CHEK2-201ENST00000328354 TRPC1P48995 793 aa13.69□□□□□ -0.22
CHEK2-201ENST00000328354 WNT3P56703 355 aa13.69□□□□□ -0.22
CHEK2-201ENST00000328354 OR4D2P58180 307 aa13.69□□□□□ -0.22
CHEK2-201ENST00000328354 REEP5Q00765 189 aa13.69□□□□□ -0.22
CHEK2-201ENST00000328354 MEF2AQ02078 507 aaPredicted RBP13.69□□□□□ -0.22
CHEK2-201ENST00000328354 CYP4F3Q08477 520 aa13.69□□□□□ -0.22
CHEK2-201ENST00000328354 RPE65Q16518 533 aa13.69□□□□□ -0.22
CHEK2-201ENST00000328354 TPRG1LQ5T0D9 272 aa13.69□□□□□ -0.22
CHEK2-201ENST00000328354 ENPP7Q6UWV6 458 aa13.69□□□□□ -0.22
CHEK2-201ENST00000328354 ABRAXAS1Q6UWZ7 409 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms