RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 RGMAQ96B86 450 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 PTERQ96BW5 349 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 MTERF3Q96E29 417 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 ART5Q96L15 291 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 OR2A14Q96R47 310 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 ZBTB18Q99592 522 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 POLR1BQ9H9Y6 1135 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 TAC3Q9UHF0 121 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 PRDM4Q9UKN5 801 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 PSME2Q9UL46 239 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 G3BP2Q9UN86 482 aaKnown RBP4.97□□□□□ -1.61
LRIT3-201ENST00000327908 RUVBL1Q9Y265 456 aaKnown RBP4.97□□□□□ -1.61
LRIT3-201ENST00000327908 MMACHCQ9Y4U1 282 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 NUMA1Q14980 2115 aa4.97□□□□□ -1.61
LRIT3-201ENST00000327908 OR52A4PA6NMU1 304 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 C21orf140B9A014 251 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.96□□□□□ -1.61
LRIT3-201ENST00000327908 DSCR3O14972 297 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 PPM1DO15297 605 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 DLX3O60479 287 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 CCNYL3P0C7X3 344 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 ARL1P40616 181 aaPredicted RBP4.96□□□□□ -1.61
LRIT3-201ENST00000327908 ETV4P43268 484 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 ATP4BP51164 291 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 GRB7Q14451 532 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 RSPO4Q2I0M5 234 aaPredicted RBP4.96□□□□□ -1.61
LRIT3-201ENST00000327908 CRTC2Q53ET0 693 aaPredicted RBP4.96□□□□□ -1.61
LRIT3-201ENST00000327908 PHF19Q5T6S3 580 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 BROXQ5VW32 411 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 METTL21CQ5VZV1 264 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 SLCO4C1Q6ZQN7 724 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 MSANTD1Q6ZTZ1 278 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 ADCK2Q7Z695 626 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 PPP1R3BQ86XI6 285 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 VRK3Q8IV63 474 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 DNAJC22Q8N4W6 341 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 CCNYL1Q8N7R7 359 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 OR2W6PQ8NHA6 318 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 ANKRD49Q8WVL7 239 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 EXT2Q93063 718 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 CCDC74BQ96LY2 380 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 OR1F2PQ96R84 312 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 SERINC2Q96SA4 455 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 TUBB6Q9BUF5 446 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 TRIM55Q9BYV6 548 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 SYNDIG1Q9H7V2 258 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 IPPKQ9H8X2 491 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 ANKHQ9HCJ1 492 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 LYRM4Q9HD34 91 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 EIF3LQ9Y262 564 aaKnown RBP4.96□□□□□ -1.61
LRIT3-201ENST00000327908 CHD9Q3L8U1 2897 aa4.96□□□□□ -1.61
LRIT3-201ENST00000327908 A0A0U1RQS6 177 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 TM4SF5O14894 197 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 NVLO15381 856 aaKnown RBP4.96□□□□□ -1.62
LRIT3-201ENST00000327908 ULK1O75385 1050 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 CSO75390 466 aaKnown RBP4.96□□□□□ -1.62
LRIT3-201ENST00000327908 GUCA1CO95843 209 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 KCNC1P48547 511 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 HSPA7P48741 367 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 MRPL19P49406 292 aaKnown RBP4.96□□□□□ -1.62
LRIT3-201ENST00000327908 RPL14P50914 215 aaKnown RBP4.96□□□□□ -1.62
LRIT3-201ENST00000327908 ANXA11P50995 505 aaKnown RBP4.96□□□□□ -1.62
LRIT3-201ENST00000327908 STX1BP61266 288 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 SIM1P81133 766 aaPredicted RBP4.96□□□□□ -1.62
LRIT3-201ENST00000327908 SLBPQ14493 270 aaKnown RBP eCLIP4.96□□□□□ -1.62
LRIT3-201ENST00000327908 RTP5Q14D33 572 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 PHKG1Q16816 387 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 ISXQ2M1V0 245 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 FRG2Q64ET8 278 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 TMPRSS11BQ86T26 416 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 RAB43Q86YS6 212 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 MCATQ8IVS2 390 aaKnown RBP4.96□□□□□ -1.62
LRIT3-201ENST00000327908 ZCCHC7Q8N3Z6 543 aaKnown RBP4.96□□□□□ -1.62
LRIT3-201ENST00000327908 ANKRD42Q8N9B4 389 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 DEFB124Q8NES8 71 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 OR2A1Q8NGT9 310 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 ZFP28Q8NHY6 868 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 POP5Q969H6 163 aaKnown RBP4.96□□□□□ -1.62
LRIT3-201ENST00000327908 ERP27Q96DN0 273 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 TGM7Q96PF1 710 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 KCNC2Q96PR1 638 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 FRG2BQ96QU4 278 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 SLC30A3Q99726 388 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 IL21RQ9HBE5 538 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 OGFRQ9NZT2 677 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 SCHIP1Q9P0W5 487 aaPredicted RBP4.96□□□□□ -1.62
LRIT3-201ENST00000327908 PLEKHM1Q9Y4G2 1056 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 PCDHGA4Q9Y5G9 962 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 LY6G6EA0A0G2JKS1 128 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 A0A1W2PPM1 405 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 G3V2L1 256 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 PSMD12O00232 456 aaPredicted RBP4.96□□□□□ -1.62
LRIT3-201ENST00000327908 NDUFAB1O14561 156 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 GPR39O43194 453 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 B4GAT1O43505 415 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 B3GALT2O43825 422 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 TBX19O60806 448 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 SCELO95171 688 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 KRT16P08779 473 aa4.96□□□□□ -1.62
LRIT3-201ENST00000327908 GRIA3P42263 894 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms