RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 GBP7Q8N8V2 638 aaPredicted RBP9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 ZNF740Q8NDX6 193 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 CEP70Q8NHQ1 597 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 CCDC74AQ96AQ1 378 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 TUBGCP3Q96CW5 907 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 HBEGFQ99075 208 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 SARGQ9BW04 601 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 ACPTQ9BZG2 426 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 ABCG4Q9H172 646 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 KCNH6Q9H252 994 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 RHBGQ9H310 441 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 AKTIPQ9H8T0 292 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 BRF2Q9HAW0 419 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 EVA1BQ9NVM1 165 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 HEY2Q9UBP5 337 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 ADGRE2Q9UHX3 823 aa9.84□□□□□ -0.83
VIPAS39-201ENST00000327028 COL5A1P20908 1838 aaPredicted RBP9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 MUC6Q6W4X9 2439 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 IGHV1OR21-1A0A087WYE8 117 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 ATP6AP2A0A1C7CYW4 349 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 NPIPB8E9PQR5 432 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 FOXE1O00358 373 aaPredicted RBP9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 HAT1O14929 419 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 DUX1O43812 170 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 LRP3O75074 770 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 ATP6AP2O75787 350 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 MAGP20916 626 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 GSTM2P28161 218 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 GRK3P35626 688 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 PIK3CBP42338 1070 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 GRK6P43250 576 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 LSSP48449 732 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 NEK2P51955 445 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 OR1D5P58170 312 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 PPP1CAP62136 330 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 SF3A2Q15428 464 aaKnown RBP9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 IMPG1Q17R60 797 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 METTL21CQ5VZV1 264 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 ADNP2Q6IQ32 1131 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 GUSBP11Q6P575 273 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 Q6ZSR9 355 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 SPRED1Q7Z699 444 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 TBC1D19Q8N5T2 526 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 HUS1BQ8NHY5 278 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 NAT6Q93015 286 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 MTFMTQ96DP5 389 aaKnown RBP9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 DMRT3Q9NQL9 472 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 EPHA6Q9UF33 1036 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 PPT2Q9UMR5 302 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 TRIM33Q9UPN9 1127 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 FEZF1A0PJY2 475 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 E9PBE3 544 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 LSM1O15116 133 aaKnown RBP9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 ZW10O43264 779 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 KLHL41O60662 606 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 RSL1D1O76021 490 aaKnown RBP9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 CKMT1AP12532 417 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 LBPP18428 481 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 PRPH2P23942 346 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 ALDH4A1P30038 563 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 SCTRP47872 440 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 DDX39BQ13838 428 aaKnown RBP9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 RBBP5Q15291 538 aaKnown RBP9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 NR6A1Q15406 480 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 ATP6AP1LQ52LC2 224 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 FCRL6Q6DN72 434 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 OGFOD2Q6N063 350 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 IRGCQ6NXR0 463 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 DBX2Q6ZNG2 339 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 ANKRD53Q8N9V6 530 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 TTLQ8NG68 377 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 BAHD1Q8TBE0 780 aaPredicted RBP9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 ZUFSPQ96AP4 578 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 PPP3R2Q96LZ3 170 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 CD180Q99467 661 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 SEMA6CQ9H3T2 930 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 KLHL20Q9Y2M5 609 aa9.83□□□□□ -0.84
VIPAS39-201ENST00000327028 USP34Q70CQ2 3546 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 LAMA1P25391 3075 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 OTOGLQ3ZCN5 2332 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 WDFY4Q6ZS81 3184 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 EME2A4GXA9 379 aaPredicted RBP9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 MAGEB17A8MXT2 336 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 FLRT2O43155 660 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 B4GAT1O43505 415 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 NRP2O60462 931 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 LMNAP02545 664 aaKnown RBP9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 SERPINA6P08185 405 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 EZRP15311 586 aaKnown RBP9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 BCL6P41182 706 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 DUSP3P51452 185 aaPredicted RBP9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 HMGCS1Q01581 520 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 RELAQ04206 551 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 SMU1Q2TAY7 513 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 FIGLAQ6QHK4 219 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 CHSY3Q70JA7 882 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 VN1R5Q7Z5H4 357 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 ZDHHC12Q96GR4 267 aa9.82□□□□□ -0.84
VIPAS39-201ENST00000327028 AHCYL2Q96HN2 611 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms