RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 CCNA2P20248 432 aa21.6■■□□□ 1.05
PNKP-201ENST00000322344 FPR1P21462 350 aa21.6■■□□□ 1.05
PNKP-201ENST00000322344 DNAJA1P31689 397 aaKnown RBP21.6■■□□□ 1.05
PNKP-201ENST00000322344 CCR3P51677 355 aa21.6■■□□□ 1.05
PNKP-201ENST00000322344 LRRC26Q2I0M4 334 aa21.6■■□□□ 1.05
PNKP-201ENST00000322344 C10orf62Q5T681 223 aaPredicted RBP21.6■■□□□ 1.05
PNKP-201ENST00000322344 CPTPQ5TA50 214 aa21.6■■□□□ 1.05
PNKP-201ENST00000322344 TMEM220Q6QAJ8 160 aa21.6■■□□□ 1.05
PNKP-201ENST00000322344 SNX19Q92543 992 aa21.6■■□□□ 1.05
PNKP-201ENST00000322344 NAA50Q9GZZ1 169 aaKnown RBP21.6■■□□□ 1.05
PNKP-201ENST00000322344 VNN3Q9NY84 501 aa21.6■■□□□ 1.05
PNKP-201ENST00000322344 KCNE2Q9Y6J6 123 aa21.6■■□□□ 1.05
PNKP-201ENST00000322344 NPC1O15118 1278 aa21.59■■□□□ 1.05
PNKP-201ENST00000322344 SLC16A8O95907 504 aa21.59■■□□□ 1.05
PNKP-201ENST00000322344 LAMP1P11279 417 aa21.59■■□□□ 1.05
PNKP-201ENST00000322344 MATN1P21941 496 aa21.59■■□□□ 1.05
PNKP-201ENST00000322344 HOXA9P31269 272 aa21.59■■□□□ 1.05
PNKP-201ENST00000322344 GTF2H3Q13889 308 aa21.59■■□□□ 1.05
PNKP-201ENST00000322344 CLECL1Q8IZS7 167 aa21.59■■□□□ 1.05
PNKP-201ENST00000322344 C1orf52Q8N6N3 182 aaKnown RBP21.59■■□□□ 1.05
PNKP-201ENST00000322344 CDC26Q8NHZ8 85 aa21.59■■□□□ 1.05
PNKP-201ENST00000322344 CHTF18Q8WVB6 975 aa21.59■■□□□ 1.05
PNKP-201ENST00000322344 CXorf40BQ96DE9 158 aa21.59■■□□□ 1.05
PNKP-201ENST00000322344 TPT1P8Q9HAU6 139 aa21.59■■□□□ 1.05
PNKP-201ENST00000322344 NAALAD2Q9Y3Q0 740 aa21.59■■□□□ 1.05
PNKP-201ENST00000322344 INSL6Q9Y581 213 aa21.59■■□□□ 1.05
PNKP-201ENST00000322344 MYOFQ9NZM1 2061 aa21.59■■□□□ 1.05
PNKP-201ENST00000322344 ZBBXA8MT70 800 aa21.58■■□□□ 1.05
PNKP-201ENST00000322344 SLC1A7O00341 560 aa21.58■■□□□ 1.05
PNKP-201ENST00000322344 ANXA4P09525 319 aaPredicted RBP21.58■■□□□ 1.05
PNKP-201ENST00000322344 STT3AP46977 705 aa21.58■■□□□ 1.05
PNKP-201ENST00000322344 RAE1P78406 368 aaKnown RBP21.58■■□□□ 1.05
PNKP-201ENST00000322344 KEAP1Q14145 624 aa21.58■■□□□ 1.05
PNKP-201ENST00000322344 CCSMST1Q4G0I0 132 aa21.58■■□□□ 1.05
PNKP-201ENST00000322344 GTF2IRD2BQ6EKJ0 949 aa21.58■■□□□ 1.05
PNKP-201ENST00000322344 MED27Q6P2C8 311 aa21.58■■□□□ 1.05
PNKP-201ENST00000322344 GTF2IRD2Q86UP8 949 aa21.58■■□□□ 1.05
PNKP-201ENST00000322344 NLRP8Q86W28 1048 aa21.58■■□□□ 1.05
PNKP-201ENST00000322344 SYNPOQ8N3V7 929 aa21.58■■□□□ 1.05
PNKP-201ENST00000322344 OR7G3Q8NG95 312 aa21.58■■□□□ 1.05
PNKP-201ENST00000322344 OR10Q1Q8NGQ4 319 aa21.58■■□□□ 1.05
PNKP-201ENST00000322344 LHPPQ9H008 270 aa21.58■■□□□ 1.05
PNKP-201ENST00000322344 GPN2Q9H9Y4 310 aaPredicted RBP21.58■■□□□ 1.05
PNKP-201ENST00000322344 LTB4R2Q9NPC1 389 aa21.58■■□□□ 1.05
PNKP-201ENST00000322344 ABCG2Q9UNQ0 655 aa21.58■■□□□ 1.05
PNKP-201ENST00000322344 ZNF197O14709 1029 aa21.58■■□□□ 1.04
PNKP-201ENST00000322344 DPM1O60762 260 aa21.58■■□□□ 1.04
PNKP-201ENST00000322344 NFATC3Q12968 1075 aa21.58■■□□□ 1.04
PNKP-201ENST00000322344 BCL7AQ4VC05 210 aa21.58■■□□□ 1.04
PNKP-201ENST00000322344 FGD3Q5JSP0 725 aa21.58■■□□□ 1.04
PNKP-201ENST00000322344 PRSS36Q5K4E3 855 aa21.58■■□□□ 1.04
PNKP-201ENST00000322344 LAIR2Q6ISS4 152 aa21.58■■□□□ 1.04
PNKP-201ENST00000322344 PARS2Q7L3T8 475 aaKnown RBP21.58■■□□□ 1.04
PNKP-201ENST00000322344 PIWIL3Q7Z3Z3 882 aaKnown RBP21.58■■□□□ 1.04
PNKP-201ENST00000322344 HORMAD1Q86X24 394 aa21.58■■□□□ 1.04
PNKP-201ENST00000322344 FAM81AQ8TBF8 368 aa21.58■■□□□ 1.04
PNKP-201ENST00000322344 SH3KBP1Q96B97 665 aa21.58■■□□□ 1.04
PNKP-201ENST00000322344 COQ8BQ96D53 544 aa21.58■■□□□ 1.04
PNKP-201ENST00000322344 ZCCHC2Q9C0B9 1178 aaKnown RBP21.58■■□□□ 1.04
PNKP-201ENST00000322344 MTG2Q9H4K7 406 aa21.58■■□□□ 1.04
PNKP-201ENST00000322344 IL23AQ9NPF7 189 aa21.58■■□□□ 1.04
PNKP-201ENST00000322344 H3BM21 787 aa21.57■■□□□ 1.04
PNKP-201ENST00000322344 XYLBO75191 536 aa21.57■■□□□ 1.04
PNKP-201ENST00000322344 ABCB1P08183 1280 aaPredicted RBP21.57■■□□□ 1.04
PNKP-201ENST00000322344 TIA1P31483 386 aaKnown RBP eCLIP21.57■■□□□ 1.04
PNKP-201ENST00000322344 DGKGP49619 791 aa21.57■■□□□ 1.04
PNKP-201ENST00000322344 ST8SIA6P61647 398 aa21.57■■□□□ 1.04
PNKP-201ENST00000322344 KDM4DQ6B0I6 523 aa21.57■■□□□ 1.04
PNKP-201ENST00000322344 CAPN13Q6MZZ7 669 aaPredicted RBP21.57■■□□□ 1.04
PNKP-201ENST00000322344 SLCO4C1Q6ZQN7 724 aa21.57■■□□□ 1.04
PNKP-201ENST00000322344 NPAS3Q8IXF0 933 aa21.57■■□□□ 1.04
PNKP-201ENST00000322344 LILRA3Q8N6C8 439 aaPredicted RBP21.57■■□□□ 1.04
PNKP-201ENST00000322344 HUS1BQ8NHY5 278 aa21.57■■□□□ 1.04
PNKP-201ENST00000322344 DTD2Q96FN9 168 aa21.57■■□□□ 1.04
PNKP-201ENST00000322344 HSH2DQ96JZ2 352 aa21.57■■□□□ 1.04
PNKP-201ENST00000322344 COQ10AQ96MF6 247 aa21.57■■□□□ 1.04
PNKP-201ENST00000322344 KLHL33A6NCF5 533 aa21.56■■□□□ 1.04
PNKP-201ENST00000322344 MGAT4DA6NG13 374 aa21.56■■□□□ 1.04
PNKP-201ENST00000322344 GABRR3A8MPY1 467 aa21.56■■□□□ 1.04
PNKP-201ENST00000322344 M0QX08 132 aa21.56■■□□□ 1.04
PNKP-201ENST00000322344 HTR1AP08908 422 aa21.56■■□□□ 1.04
PNKP-201ENST00000322344 HNRNPA1P09651 372 aaKnown RBP eCLIP21.56■■□□□ 1.04
PNKP-201ENST00000322344 ITIH1P19827 911 aa21.56■■□□□ 1.04
PNKP-201ENST00000322344 ENTPD1P49961 510 aa21.56■■□□□ 1.04
PNKP-201ENST00000322344 CDK5R2Q13319 367 aa21.56■■□□□ 1.04
PNKP-201ENST00000322344 GALNT18Q6P9A2 607 aa21.56■■□□□ 1.04
PNKP-201ENST00000322344 CYP4Z1Q86W10 505 aa21.56■■□□□ 1.04
PNKP-201ENST00000322344 MUL1Q969V5 352 aa21.56■■□□□ 1.04
PNKP-201ENST00000322344 WDR34Q96EX3 536 aa21.56■■□□□ 1.04
PNKP-201ENST00000322344 NODALQ96S42 347 aa21.56■■□□□ 1.04
PNKP-201ENST00000322344 C11orf49Q9H6J7 331 aa21.56■■□□□ 1.04
PNKP-201ENST00000322344 SIRT5Q9NXA8 310 aa21.56■■□□□ 1.04
PNKP-201ENST00000322344 ZNF282Q9UDV7 671 aaPredicted RBP21.56■■□□□ 1.04
PNKP-201ENST00000322344 VPS4AQ9UN37 437 aa21.56■■□□□ 1.04
PNKP-201ENST00000322344 ERVK-11Q9UQG0 969 aa21.56■■□□□ 1.04
PNKP-201ENST00000322344 BTBD3Q9Y2F9 522 aa21.56■■□□□ 1.04
PNKP-201ENST00000322344 PTPRSQ13332 1948 aa21.56■■□□□ 1.04
PNKP-201ENST00000322344 A0A0J9YVX5 310 aa21.56■■□□□ 1.04
PNKP-201ENST00000322344 C1orf226A1L170 272 aa21.56■■□□□ 1.04
PNKP-201ENST00000322344 MYO1GB0I1T2 1018 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms