RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 FRRS1Q6ZNA5 592 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 UBQLNLQ8IYU4 475 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 NATD1Q8N6N6 113 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 SSX3Q99909 188 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 DPCDQ9BVM2 203 aaPredicted RBP6.87□□□□□ -1.31
SMC1A-201ENST00000322213 FAIM2Q9BWQ8 316 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 TFB2MQ9H5Q4 396 aaKnown RBP6.87□□□□□ -1.31
SMC1A-201ENST00000322213 KLK14Q9P0G3 267 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 TCRBV3S1A0A5B6 114 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 MSI1O43347 362 aaKnown RBP6.87□□□□□ -1.31
SMC1A-201ENST00000322213 SMIM18P0DKX4 95 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 GSTM3P21266 225 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 RPL9P32969 192 aaKnown RBP6.87□□□□□ -1.31
SMC1A-201ENST00000322213 MAPK8P45983 427 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 CLCN3P51790 818 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 TAS2R43P59537 309 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 CDONQ4KMG0 1287 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 TAPT1Q6NXT6 567 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 NDC1Q9BTX1 674 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 LGR4Q9BXB1 951 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 BCL2L14Q9BZR8 327 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 TRPV4Q9HBA0 871 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 INIPQ9NRY2 104 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 KCTD5Q9NXV2 234 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 PRKYO43930 277 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 DLX3O60479 287 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 KRT33AO76009 404 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 CLCN4P51793 760 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 RPL19P84098 196 aaKnown RBP6.87□□□□□ -1.31
SMC1A-201ENST00000322213 OXA1LQ15070 435 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 TATDN1Q6P1N9 297 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 C3orf33Q6P1S2 294 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 BLOC1S3Q6QNY0 202 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 SERPINA13PQ6UXR4 307 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 OTOP3Q7RTS5 596 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 GLOD4Q9HC38 313 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 MGAT4CQ9UBM8 478 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 INTS6Q9UL03 887 aaKnown RBP6.87□□□□□ -1.31
SMC1A-201ENST00000322213 NUP210LQ5VU65 1888 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 PRORSD1PA6NEY8 169 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 ZNF487B1APH4 448 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 NDST3O95803 873 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 RPL17P18621 184 aaKnown RBP6.87□□□□□ -1.31
SMC1A-201ENST00000322213 PCSK6P29122 969 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 AXLP30530 894 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 GMPRP36959 345 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 RPL35P42766 123 aaKnown RBP6.87□□□□□ -1.31
SMC1A-201ENST00000322213 SNRPD2P62316 118 aaKnown RBP6.87□□□□□ -1.31
SMC1A-201ENST00000322213 PARP15Q460N3 678 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 ZNF227Q86WZ6 799 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 ING5Q8WYH8 240 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 PIWIL1Q96J94 861 aaKnown RBP6.87□□□□□ -1.31
SMC1A-201ENST00000322213 EXO5Q9H790 373 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 ENAMQ9NRM1 1142 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 TRPS1Q9UHF7 1281 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 EML6Q6ZMW3 1958 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 QSOX1O00391 747 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 BCAS1O75363 584 aaPredicted RBP6.87□□□□□ -1.31
SMC1A-201ENST00000322213 RGS9O75916 674 aaPredicted RBP6.87□□□□□ -1.31
SMC1A-201ENST00000322213 ZNF10P21506 573 aaPredicted RBP6.87□□□□□ -1.31
SMC1A-201ENST00000322213 L1CAMP32004 1257 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 GRSF1Q12849 480 aaKnown RBP eCLIP6.87□□□□□ -1.31
SMC1A-201ENST00000322213 APOFQ13790 326 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 CYBRD1Q53TN4 286 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 RANBP3LQ86VV4 465 aaPredicted RBP6.87□□□□□ -1.31
SMC1A-201ENST00000322213 C3orf58Q8NDZ4 430 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 OR4C6Q8NH72 309 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 PCDH19Q8TAB3 1148 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 NEDD4LQ96PU5 975 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 TMEM39BQ9GZU3 492 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 COMMD4Q9H0A8 199 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 TIMM22Q9Y584 194 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 A8MT66 165 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 ALDH1A2O94788 518 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 SNHG28P0DPA3 235 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 CRHBPP24387 322 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 PIK3CBP42338 1070 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 E2F1Q01094 437 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 PPP1R3AQ16821 1122 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 SPIN4Q56A73 249 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 ZNF311Q5JNZ3 666 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 HES5Q5TA89 166 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 ZNF691Q5VV52 312 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 SLC25A25Q6KCM7 469 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 FAM83AQ86UY5 434 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 SGK2Q9HBY8 427 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 ATP13A2Q9NQ11 1180 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 C1orf109Q9NX04 203 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 PADI2Q9Y2J8 665 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 COQ4Q9Y3A0 265 aa6.87□□□□□ -1.31
SMC1A-201ENST00000322213 COL5A3P25940 1745 aaPredicted RBP6.87□□□□□ -1.31
SMC1A-201ENST00000322213 SEC14L2O76054 403 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 LDOC1O95751 146 aaPredicted RBP6.86□□□□□ -1.31
SMC1A-201ENST00000322213 EGFRP00533 1210 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 HNF1BP35680 557 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 OGDHQ02218 1023 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 IRF8Q02556 426 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 LGI4Q8N135 537 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 TSEN15Q8WW01 171 aaKnown RBP6.86□□□□□ -1.31
SMC1A-201ENST00000322213 NELL2Q99435 816 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms