RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 KRT6AP02538 564 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 KRT6BP04259 564 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 CXCR2P25025 360 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 KDELR2P33947 212 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 KRT6CP48668 564 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 PTPN5P54829 565 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 TMPRSS11AQ6ZMR5 421 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 C11orf96Q7Z7L8 435 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 DPF3Q92784 378 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 ACPTQ9BZG2 426 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 MRM3Q9HC36 420 aaKnown RBP13.76□□□□□ -0.21
PABPC1-201ENST00000318607 HSPB11Q9Y547 144 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.76□□□□□ -0.21
PABPC1-201ENST00000318607 SMIM35A0A1B0GVV1 85 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 A0A1W2PQ09 198 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 TRIM64A6NGJ6 449 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 TSPAN12O95859 305 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 LAMP1P11279 417 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 DNAJA1P31689 397 aaKnown RBP13.76□□□□□ -0.21
PABPC1-201ENST00000318607 SGSHP51688 502 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 CRYBB1P53674 252 aaPredicted RBP13.76□□□□□ -0.21
PABPC1-201ENST00000318607 HOXC5Q00444 222 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 ELP6Q0PNE2 266 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 ZNF177Q13360 481 aaPredicted RBP13.76□□□□□ -0.21
PABPC1-201ENST00000318607 IRF3Q14653 427 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 BAK1Q16611 211 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 AGAP6Q5VW22 663 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 TMIGD1Q6UXZ0 262 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 MON1AQ86VX9 555 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 ENKURQ8TC29 256 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 GGHQ92820 318 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 TP53INP1Q96A56 240 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 YIPF6Q96EC8 236 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 CCDC120Q96HB5 630 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 AGAP4Q96P64 663 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 NUSAP1Q9BXS6 441 aaKnown RBP13.76□□□□□ -0.21
PABPC1-201ENST00000318607 ADGRE3Q9BY15 652 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 IL1RAPQ9NPH3 570 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 ZNF639Q9UID6 485 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 MANBAO00462 879 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 TACR2P21452 398 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 RAB8AP61006 207 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 ACOX1Q15067 660 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 ANKS3Q6ZW76 656 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 OLIG3Q7RTU3 272 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 LGI4Q8N135 537 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 GPC2Q8N158 579 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 OR10G2Q8NGC3 310 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 PGAP3Q96FM1 320 aaPredicted RBP13.76□□□□□ -0.21
PABPC1-201ENST00000318607 MGLLQ99685 303 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 ACBD6Q9BR61 282 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 SLC30A2Q9BRI3 323 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 ACAT2Q9BWD1 397 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 ASPNQ9BXN1 380 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 MMP27Q9H306 513 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 CRISPLD1Q9H336 500 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 SP140LQ9H930 580 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 C8orf4Q9NR00 106 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 FZD4Q9ULV1 537 aa13.76□□□□□ -0.21
PABPC1-201ENST00000318607 CCDC88CQ9P219 2028 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 CCDC182A6NF36 153 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 CACNG3O60359 315 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 GJB5O95377 273 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 ZNF135P52742 658 aaPredicted RBP13.75□□□□□ -0.21
PABPC1-201ENST00000318607 TPGS1Q6ZTW0 290 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 CYP2U1Q7Z449 544 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 ADAMTSL2Q86TH1 951 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 COQ8BQ96D53 544 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 C1GALT1C1Q96EU7 318 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 PPT2Q9UMR5 302 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 SAMD4AQ9UPU9 718 aaKnown RBP13.75□□□□□ -0.21
PABPC1-201ENST00000318607 PRELID1Q9Y255 219 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 YARS2Q9Y2Z4 477 aaKnown RBP13.75□□□□□ -0.21
PABPC1-201ENST00000318607 LOC285095A0A1B0GVY8 99 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 METTL15A6NJ78 407 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 OR2AG2A6NM03 316 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 M0QX08 132 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 HIST1H2AGP0C0S8 130 aaPredicted RBP13.75□□□□□ -0.21
PABPC1-201ENST00000318607 HIST1H2ADP20671 130 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 CBLP22681 906 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 IFNA8P32881 189 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 MEF2AQ02078 507 aaPredicted RBP13.75□□□□□ -0.21
PABPC1-201ENST00000318607 CSTF3Q12996 717 aaKnown RBP13.75□□□□□ -0.21
PABPC1-201ENST00000318607 CDH18Q13634 790 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 KBTBD8Q8NFY9 601 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 OR8J3Q8NGG0 315 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 KCNN1Q92952 543 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 VMP1Q96GC9 406 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 HIST1H2AHQ96KK5 128 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 HIST1H2AJQ99878 128 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 H2AFJQ9BTM1 129 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 ARNT2Q9HBZ2 717 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 SPTBP11277 2137 aa13.75□□□□□ -0.21
PABPC1-201ENST00000318607 SAGE2PA6NJ88 616 aa13.74□□□□□ -0.21
PABPC1-201ENST00000318607 MAGEB17A8MXT2 336 aa13.74□□□□□ -0.21
PABPC1-201ENST00000318607 CXCL11O14625 94 aa13.74□□□□□ -0.21
PABPC1-201ENST00000318607 B4GALT3O60512 393 aa13.74□□□□□ -0.21
PABPC1-201ENST00000318607 CDRT1O95170 752 aa13.74□□□□□ -0.21
PABPC1-201ENST00000318607 IL6P05231 212 aa13.74□□□□□ -0.21
PABPC1-201ENST00000318607 ETFAP13804 333 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms