RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 TRAM1L1Q8N609 369 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 TRPV3Q8NET8 790 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 MRPL38Q96DV4 380 aaKnown RBP7.36□□□□□ -1.23
TRIM55-202ENST00000315962 DTD2Q96FN9 168 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 APIPQ96GX9 242 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 ABHD8Q96I13 439 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 OR4K3Q96R72 315 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 UHRF1Q96T88 793 aaPredicted RBP7.36□□□□□ -1.23
TRIM55-202ENST00000315962 SLC12A9Q9BXP2 914 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 ALOXE3Q9BYJ1 711 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 SLC32A1Q9H598 525 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 ARMC1Q9NVT9 282 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 GDE1Q9NZC3 331 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 DENND4CQ5VZ89 1909 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 RASAL1O95294 804 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 SRPRAP08240 638 aaKnown RBP7.36□□□□□ -1.23
TRIM55-202ENST00000315962 PORP16435 677 aaPredicted RBP7.36□□□□□ -1.23
TRIM55-202ENST00000315962 CDH3P22223 829 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 ZFP36L2P47974 494 aaKnown RBP7.36□□□□□ -1.23
TRIM55-202ENST00000315962 PLA2G16P53816 162 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 TAS2R38P59533 333 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 PFN3P60673 137 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 ERVK-8P63133 956 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 IRF8Q02556 426 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 GSTM4Q03013 218 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 PON2Q15165 354 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 TRIM16LQ309B1 348 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 ZNF829Q3KNS6 432 aaPredicted RBP7.36□□□□□ -1.23
TRIM55-202ENST00000315962 ANKRD54Q6NXT1 300 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 SPESP1Q6UW49 350 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 TNIP2Q8NFZ5 429 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 OR5AR1Q8NGP9 310 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 CNIH3Q8TBE1 160 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 PNPT1Q8TCS8 783 aaKnown RBP7.36□□□□□ -1.23
TRIM55-202ENST00000315962 CXorf40AQ8TE69 158 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 TAMM41Q96BW9 452 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 PKP4Q99569 1192 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 TOR3AQ9H497 397 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 NANOGQ9H9S0 305 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 ITM2CQ9NQX7 267 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 AIG1Q9NVV5 245 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 WDR70Q9NW82 654 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 LIMD1Q9UGP4 676 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 ASF1AQ9Y294 204 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 PCDHGA8Q9Y5G5 932 aa7.36□□□□□ -1.23
TRIM55-202ENST00000315962 TBC1D3DA0A087WVF3 549 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 TBC1D3IA0A087WXS9 549 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 TBC1D3EA0A087X179 549 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 TBC1D3KA0A087X1G2 549 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 TBC1D3FA6NER0 549 aaPredicted RBP7.35□□□□□ -1.23
TRIM55-202ENST00000315962 TBC1D3LB9A6J9 549 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 MANBAO00462 879 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 AREL1O15033 823 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 DIRAS1O95057 198 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 TBC1D3HP0C7X1 549 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 ITGB7P26010 798 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 HNF4AP41235 474 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 MAP2K4P45985 399 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 CLDN2P57739 230 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 SKIV2LQ15477 1246 aaKnown RBP7.35□□□□□ -1.23
TRIM55-202ENST00000315962 NKG7Q16617 165 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 WSCD2Q2TBF2 565 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 CTU2Q2VPK5 515 aaKnown RBP7.35□□□□□ -1.23
TRIM55-202ENST00000315962 C6orf183Q5T699 404 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 TBC1D3GQ6DHY5 549 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 GLYATQ6IB77 296 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 TBC1D3CQ6IPX1 549 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 AGTRAPQ6RW13 159 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 TMPRSS11BQ86T26 416 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 TBC1D3Q8IZP1 549 aaPredicted RBP7.35□□□□□ -1.23
TRIM55-202ENST00000315962 DTWD1Q8N5C7 304 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 HPS1Q92902 700 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 NEIL2Q969S2 332 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 CCDC138Q96M89 665 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 CCM2Q9BSQ5 444 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 IKZF5Q9H5V7 419 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 RIC8BQ9NVN3 520 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 FBXL12Q9NXK8 326 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 ACTR3BQ9P1U1 418 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 KCNK6Q9Y257 313 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 PCDHA9Q9Y5H5 950 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 KRBA1A5PL33 1030 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 K7EQS6 105 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 IFRD1O00458 451 aaPredicted RBP7.35□□□□□ -1.23
TRIM55-202ENST00000315962 DFNA5O60443 496 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 MITFO75030 526 aaPredicted RBP7.35□□□□□ -1.23
TRIM55-202ENST00000315962 ETHE1O95571 254 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 ACP5P13686 325 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 DCKP27707 260 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 PSMB5P28074 263 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 HTR1BP28222 390 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 MTHFRP42898 656 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 CYP4F2P78329 520 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 IFITM3Q01628 133 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 FCHO2Q0JRZ9 810 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 FGL2Q14314 439 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 CST6Q15828 149 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 TMTC4Q5T4D3 741 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 XAF1Q6GPH4 301 aa7.35□□□□□ -1.23
TRIM55-202ENST00000315962 DHRS4L2Q6PKH6 230 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms