RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 BIRC2Q13490 618 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 SMN1Q16637 294 aaKnown RBP7.55□□□□□ -1.2
CNOT4-201ENST00000315544 CYP2A13Q16696 494 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 MORN4Q8NDC4 146 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 DDHD1Q8NEL9 900 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 COQ10AQ96MF6 247 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 HGH1Q9BTY7 390 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 BRF2Q9HAW0 419 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 RNF6Q9Y252 685 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 ZFHX3Q15911 3703 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 HIDE1A8MVS5 230 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 SCO2O43819 266 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 IL6P05231 212 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 CAPN1P07384 714 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 LIM2P55344 173 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 OXCT1P55809 520 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 BNC1Q01954 994 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 HTR4Q13639 388 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 MLC1Q15049 377 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 FBXO48Q5FWF7 155 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 SPANXN4Q5MJ08 99 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 DNAJC22Q8N4W6 341 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 DCAF4L2Q8NA75 395 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 SLC13A3Q8WWT9 602 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 SCRN2Q96FV2 425 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 MSANTD3Q96H12 275 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 HIC2Q96JB3 615 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 SPNS1Q9H2V7 528 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 SLC32A1Q9H598 525 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 ASAH2Q9NR71 780 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 ABCB8Q9NUT2 735 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 SEPT10Q9P0V9 454 aa7.55□□□□□ -1.2
CNOT4-201ENST00000315544 SHISA3A0PJX4 238 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 TPST2O60704 377 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 LGI1O95970 557 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 IGSF6O95976 241 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 NTRK1P04629 796 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 SERPINF2P08697 491 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 TSPAN19P0C672 248 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 ZNF528Q3MIS6 628 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 GLYATQ6IB77 296 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 ZNF852Q6ZMS4 543 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 MBOAT1Q6ZNC8 495 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 ZBTB49Q6ZSB9 765 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 ELMOD1Q8N336 334 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 FIBINQ8TAL6 211 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 HAVCR2Q8TDQ0 301 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 GPR152Q8TDT2 470 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 FBXL8Q96CD0 374 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 SCARF2Q96GP6 870 aaPredicted RBP7.54□□□□□ -1.2
CNOT4-201ENST00000315544 PYURFQ96I23 114 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 OR2A14Q96R47 310 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 MIXL1Q9H2W2 232 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 HHATLQ9HCP6 504 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 TAS2R13Q9NYV9 303 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 CCDC59Q9P031 241 aaKnown RBP7.54□□□□□ -1.2
CNOT4-201ENST00000315544 EIF3LQ9Y262 564 aaKnown RBP7.54□□□□□ -1.2
CNOT4-201ENST00000315544 PCDHB7Q9Y5E2 793 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 RAI2Q9Y5P3 530 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 PTPRBP23467 1997 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 SSX4O60224 188 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 BAG2O95816 211 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 FCGR1AP12314 374 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 TCN1P20061 433 aaPredicted RBP7.54□□□□□ -1.2
CNOT4-201ENST00000315544 GPM6BQ13491 265 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 SEC23BQ15437 767 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 GPRIN3Q6ZVF9 776 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 TSPAN33Q86UF1 283 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 MICU2Q8IYU8 434 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 MAML2Q8IZL2 1156 aaPredicted RBP7.54□□□□□ -1.2
CNOT4-201ENST00000315544 OR5K1Q8NHB7 308 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 VPS50Q96JG6 964 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 GPA33Q99795 319 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 EPHX3Q9H6B9 360 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 SFXN1Q9H9B4 322 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 PCSK5Q92824 1860 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 CLDN11O75508 207 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 THRBP10828 461 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 BTCP35070 178 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 PCGF2P35227 344 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 PIGFQ07326 219 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 ATP1A4Q13733 1029 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.54□□□□□ -1.2
CNOT4-201ENST00000315544 GALNT4Q8N4A0 578 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 CMTM7Q96FZ5 175 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 ZNF558Q96NG5 402 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 SH3BP4Q9P0V3 963 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 ANKMY1Q9P2S6 941 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 ANAPC2Q9UJX6 822 aa7.54□□□□□ -1.2
CNOT4-201ENST00000315544 PRKCDQ05655 676 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 ZNF155Q12901 538 aaPredicted RBP7.53□□□□□ -1.2
CNOT4-201ENST00000315544 TBCELQ5QJ74 424 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 TMEM214Q6NUQ4 689 aaKnown RBP7.53□□□□□ -1.2
CNOT4-201ENST00000315544 EIF3MQ7L2H7 374 aaKnown RBP7.53□□□□□ -1.2
CNOT4-201ENST00000315544 LPCAT2Q7L5N7 544 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 DSG4Q86SJ6 1040 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.53□□□□□ -1.2
CNOT4-201ENST00000315544 NXPE1Q8N323 547 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 AADATQ8N5Z0 425 aa7.53□□□□□ -1.2
CNOT4-201ENST00000315544 C1orf52Q8N6N3 182 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms